DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and adamts6

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_002934253.2 Gene:adamts6 / 100490362 XenbaseID:XB-GENE-951750 Length:1118 Species:Xenopus tropicalis


Alignment Length:637 Identity:156/637 - (24%)
Similarity:228/637 - (35%) Gaps:168/637 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HYEL---VQLQH---------HENNHNRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEA 100
            ||:|   :::.|         :.:.|.|||||:          .|....:|.||           
 Frog    41 HYQLTVPIRVDHNGAFVSFTVNSDKHLRRRRSV----------DPRDQDQDASK----------- 84

  Fly   101 LASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPH-QLRMWTVGSEPNATHGLD 164
                   ||           ...||:|:|.:|:|.....|.  :.| .:..|.... |...|   
 Frog    85 -------LF-----------FKISAYGKHFHLNLTLNTDLV--SKHFTVEYWGKNG-PEWKH--- 125

  Fly   165 LQEIVHEQHTSNDVGEVFQDEKNMAAILMRR----HMETGDLIMEGSIGHDLVIKPLPHELSPNP 225
              :.:...|.:.    ..||:.....:.:..    |   |.:..|   ..:..|:||.:....:.
 Frog   126 --DFIDNCHYTG----YLQDQNTTTKVALSNCNGLH---GVIATE---DEEYFIEPLDNVTENSK 178

  Fly   226 EESH-----HIIYKREA-------SAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAP-- 276
            ..||     |:||::.|       :.....:.||                       :..|.|  
 Frog   179 HYSHEMGHPHVIYRKSAIHHRHSSNQPHCGVKDF-----------------------TGNSKPWW 220

  Fly   277 -----SSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQV 336
                 |:|.....||.:.|     |:      |.||......:.|.||:.|......||  ...:
 Frog   221 YNHKFSTPPVPSDNDTENG-----PR------RQRRSVSIERFVETLVVADKMMVGYHG--RKDI 272

  Fly   337 KRYFISFWNGVDLRYR-LLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDS-----AAALT 395
            :.|.:|..|.|...|| ...|..:.|.:..:|:.  .:..|.||.|.....::||     .:.|:
 Frog   273 EHYILSVMNIVAKLYRDSSLGNVVNIIVTRLIVL--TEDQPNLEINHHADKSLDSFCKWQKSILS 335

  Fly   396 DMGK-YLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAI 459
            .... ....|..:..:|.||.||:.|:|    .|.....||.|.|.|.|.|      |...|.:|
 Frog   336 HQSDGNTIPENGIAHHDNAVLITRYDIC----TYKNKPCGTLGLASVAGMC------EPERSCSI 390

  Fly   460 IEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSAC 524
            .||.|..|...: |||:||..|..|||.  .:..|..|.:..:....:|.|:    ...|.||||
 Frog   391 NEDIGLGSAFTI-AHEIGHNFGMNHDGI--GNSCGTKGHEAAKLMAAHITSN----TNPFSWSAC 448

  Fly   525 TVQSFHHFLNGDTATCLHN-APHEDSALGRSLPGTLLSLDAQCRRDRGTYA--CFKDERVCAQLF 586
            :......||:....|||.| .|..|.......||.:...|.|||...|..:  | |...||.:|:
 Frog   449 SRDYITSFLDSGRGTCLDNEPPKRDFVYPAVAPGQVYDADEQCRFQYGATSRQC-KYGEVCRELW 512

  Fly   587 CFDAQTGYCVAYR-PAAEGSACGNGY----HCLDGRCTPL---PSNIIPDYG 630
            |. :::..||... |||||:.|..|.    .|..|.|.|.   |.:|..|:|
 Frog   513 CL-SKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGDCVPFGTWPKSIDGDWG 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 67/235 (29%)
adamts6XP_002934253.2 Pep_M12B_propep 43..191 CDD:366707 37/204 (18%)
ZnMc_ADAMTS_like 251..466 CDD:239801 67/235 (29%)
ADAM_CR_2 481..549 CDD:375321 24/69 (35%)
TSP1 562..614 CDD:214559 1/2 (50%)
ADAM_spacer1 718..830 CDD:368694
TSP1 849..901 CDD:214559
TSP1 903..961 CDD:214559
TSP1 1023..1070 CDD:214559
PLAC 1084..1116 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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