DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and adamts6

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_002934253.2 Gene:adamts6 / 100490362 XenbaseID:XB-GENE-951750 Length:1118 Species:Xenopus tropicalis


Alignment Length:637 Identity:156/637 - (24%)
Similarity:228/637 - (35%) Gaps:168/637 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HYEL---VQLQH---------HENNHNRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEA 100
            ||:|   :::.|         :.:.|.|||||:          .|....:|.||           
 Frog    41 HYQLTVPIRVDHNGAFVSFTVNSDKHLRRRRSV----------DPRDQDQDASK----------- 84

  Fly   101 LASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPH-QLRMWTVGSEPNATHGLD 164
                   ||           ...||:|:|.:|:|.....|.  :.| .:..|.... |...|   
 Frog    85 -------LF-----------FKISAYGKHFHLNLTLNTDLV--SKHFTVEYWGKNG-PEWKH--- 125

  Fly   165 LQEIVHEQHTSNDVGEVFQDEKNMAAILMRR----HMETGDLIMEGSIGHDLVIKPLPHELSPNP 225
              :.:...|.:.    ..||:.....:.:..    |   |.:..|   ..:..|:||.:....:.
 Frog   126 --DFIDNCHYTG----YLQDQNTTTKVALSNCNGLH---GVIATE---DEEYFIEPLDNVTENSK 178

  Fly   226 EESH-----HIIYKREA-------SAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAP-- 276
            ..||     |:||::.|       :.....:.||                       :..|.|  
 Frog   179 HYSHEMGHPHVIYRKSAIHHRHSSNQPHCGVKDF-----------------------TGNSKPWW 220

  Fly   277 -----SSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQV 336
                 |:|.....||.:.|     |:      |.||......:.|.||:.|......||  ...:
 Frog   221 YNHKFSTPPVPSDNDTENG-----PR------RQRRSVSIERFVETLVVADKMMVGYHG--RKDI 272

  Fly   337 KRYFISFWNGVDLRYR-LLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDS-----AAALT 395
            :.|.:|..|.|...|| ...|..:.|.:..:|:.  .:..|.||.|.....::||     .:.|:
 Frog   273 EHYILSVMNIVAKLYRDSSLGNVVNIIVTRLIVL--TEDQPNLEINHHADKSLDSFCKWQKSILS 335

  Fly   396 DMGK-YLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAI 459
            .... ....|..:..:|.||.||:.|:|    .|.....||.|.|.|.|.|      |...|.:|
 Frog   336 HQSDGNTIPENGIAHHDNAVLITRYDIC----TYKNKPCGTLGLASVAGMC------EPERSCSI 390

  Fly   460 IEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSAC 524
            .||.|..|...: |||:||..|..|||.  .:..|..|.:..:....:|.|:    ...|.||||
 Frog   391 NEDIGLGSAFTI-AHEIGHNFGMNHDGI--GNSCGTKGHEAAKLMAAHITSN----TNPFSWSAC 448

  Fly   525 TVQSFHHFLNGDTATCLHN-APHEDSALGRSLPGTLLSLDAQCRRDRGTYA--CFKDERVCAQLF 586
            :......||:....|||.| .|..|.......||.:...|.|||...|..:  | |...||.:|:
 Frog   449 SRDYITSFLDSGRGTCLDNEPPKRDFVYPAVAPGQVYDADEQCRFQYGATSRQC-KYGEVCRELW 512

  Fly   587 CFDAQTGYCVAYR-PAAEGSACGNGY----HCLDGRCTPL---PSNIIPDYG 630
            |. :::..||... |||||:.|..|.    .|..|.|.|.   |.:|..|:|
 Frog   513 CL-SKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGDCVPFGTWPKSIDGDWG 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 67/235 (29%)
ADAMTS_CR_2 556..619 CDD:465496 24/69 (35%)
adamts6XP_002934253.2 Pep_M12B_propep 43..191 CDD:460254 37/204 (18%)
ZnMc_ADAMTS_like 251..466 CDD:239801 67/235 (29%)
ADAMTS_CR_2 481..549 CDD:465496 24/69 (35%)
TSP1 562..614 CDD:214559 1/2 (50%)
ADAMTS_CR_3 619..717 CDD:437068
ADAMTS_spacer1 720..830 CDD:461796
TSP1_ADAMTS 845..900 CDD:465950
TSP1_ADAMTS 904..960 CDD:465950
TSP1_ADAMTS 964..1018 CDD:465950
TSP1_ADAMTS 1023..1072 CDD:465950
PLAC 1084..1116 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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