DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adam28

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001233133.1 Gene:adam28 / 100488450 XenbaseID:XB-GENE-982024 Length:780 Species:Xenopus tropicalis


Alignment Length:1037 Identity:195/1037 - (18%)
Similarity:318/1037 - (30%) Gaps:359/1037 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSPLVLFTALLLVSSTICQGLPDLHKQMTPEQLQSVFHVDTHDAVPHYELVQLQHHENNHNRRR 65
            |..||:|.||.||:..      |...:::|         :|     |:||:|   ..:..|.:.:
 Frog     1 MLLPLLLLTAGLLLPQ------PAASQKLT---------ID-----PYYEVV---FPKKIHAQHK 42

  Fly    66 RSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQHL 130
            |.:                     ...|.|:....:..||.||.   :...|:.::        |
 Frog    43 RDV---------------------QGMYPEVVQYGIHMGGKHLI---LHLEKNEDL--------L 75

  Fly   131 NLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAIL--- 192
            :.:...|..|..|.|       |.:.|.      :|...:.|      |.|..|..::|:|.   
 Frog    76 SANYTETYYLSDGTP-------VTTSPK------IQNHCYYQ------GNVKNDNGSLASISTCS 121

  Fly   193 -MRRHMETGDLIMEGSIGHDLVIKPLPHELSPNPEESHHIIYKREASAAEGQLSDFAFMEPDDLL 256
             :|..::|     ||.:   .:|:||     .:.:...|.:|       |.|:            
 Frog   122 GLRGLIQT-----EGQM---YLIEPL-----KDTDSESHAVY-------EAQM------------ 154

  Fly   257 ASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYII----YPEV 317
                             ..|.:...::....:|..      |.:||:.|..:...|:    |..:
 Frog   155 -----------------ETPKTCGVDNTTYREEIV------VKKSRSGSSAEQQQILKAQKYIRL 196

  Fly   318 LVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIRISIAGIIISRGRDATPYLERNR 382
            :|:.|...:..:......||.......|.|::.|:.:   ...:::.||.:....|      :.:
 Frog   197 VVVADNSMFIKYNKSITNVKIRIFEVINFVNVVYKAI---NTFVALIGIEVWNTTD------QFK 252

  Fly   383 VGRDAIDSAAALTDMGKYLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVV 447
            |...|....||..|..|.:.. ||.| .|.|..:|..|.          :..|.|.||||..|  
 Frog   253 VVTSASADLAAFADWRKNVLL-RRTP-NDNAQLLTNTDF----------DGATVGLAYVGTEC-- 303

  Fly   448 NKRLEKVNSVAIIEDTGGFS-GI-IVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMS 510
                .:.:|..:|:|....| |: ...|||:||.||..||......     .|..|      ||:
 Frog   304 ----SETHSAGVIQDHSKASIGVGATVAHELGHNLGMNHDTDSCSC-----SASSC------IMA 353

  Fly   511 DLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPG---TLLSLDAQCRR-DRG 571
            ..........:|:|::|::..||......|:...|.::..:..::.|   |.:..|..|.. :..
 Frog   354 PYLSVNTPRLFSSCSLQNYQDFLLSRMPQCMLAVPLKEDIIAPAVCGNKFTEIGEDCDCGTVEEC 418

  Fly   572 TYAC-------FKDERVCAQLFC-------------------------FDAQTGYCVAYRPAAEG 604
            |..|       .|....||:..|                         .|.::..|.:.|....|
 Frog   419 TNQCCDAATCKLKSTAKCAEGDCCDNCQIKKAGSVCRAAKDDCDLADMCDGKSSVCPSDRFRVNG 483

  Fly   605 SACGNGY-HCLDGRCTPLPSNIIPDYGHNYRLVYNKIDNKKDAAEDVESSSEETESQEDETESVE 668
            ..|.||. :|.:|:|....|.....:|                |..|.|        ||...:|.
 Frog   484 FPCSNGKGYCFNGKCPTHQSQCTTLWG----------------ASSVPS--------EDSCFNVN 524

  Fly   669 DQ--DEGTTSSEEQEDNKIEQSSAAGGAAAQSTTTARSTTTTTVRTTSTTTTTAKPKSKSFGYLH 731
            .:  |.|             ..:.||                      .|....|||....|.|.
 Frog   525 TRGVDYG-------------YCTMAG----------------------ATYVPCKPKDVKCGMLF 554

  Fly   732 --------------------RSLPERQWMQDNGVLVTTRISSSVSSSSSGSSSGEAAATSTRRPT 776
                                |::..:..|..||    |:....:...:...||.|:|..|     
 Frog   555 CYGGSSQPSIYAAVAEFSRCRAVLAQGGMVQNG----TKCGDGMVCYNGACSSIESAYRS----- 610

  Fly   777 TTTTTQTPNLFQIYTHELRKQIEYYLHMLQTQQHATKFQPEQQQQQSQQQQSIVEIPLV------ 835
            |..:.|... ..:..||:..|.|            ..:.|......|.....|:.:.:|      
 Frog   611 TNCSAQCSG-HAVCDHEMLCQCE------------EGWAPPTCDVASPTNIIIIVVVIVIALALV 662

  Fly   836 ---------------QKSLTNYSVT-SSSSSTSNGAKQQPPSNKDENQRQQQQQQQAQQQLQDGL 884
                           ::|.:::..| :...||:...:.|||                 .|:|..|
 Frog   663 IGLVFLARFYRGKGKKQSSSSFPATVTVEGSTNPSFRNQPP-----------------PQMQMPL 710

  Fly   885 PD--EENEATAGIQSNEAIERQKRKFPTTPTAATSAAQKSATPATPATSATSARPTPTTAKP 944
            |.  :...||........:..|..::..| ||:..|..|...|.........|:|.|..|.|
 Frog   711 PQVHKPKPATDKSWPPSRVGYQAPQYSVT-TASPQAEPKLKKPTVAPPPVPPAKPAPPPAPP 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 55/234 (24%)
ADAMTS_CR_2 556..619 CDD:465496 19/99 (19%)
adam28NP_001233133.1 Pep_M12B_propep 30..150 CDD:460254 33/186 (18%)
ZnMc_adamalysin_II_like 192..385 CDD:239797 55/230 (24%)
Disintegrin 405..477 CDD:459709 10/71 (14%)
ACR 482..601 CDD:214743 30/181 (17%)

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