DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamts12

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_017946319.2 Gene:adamts12 / 100380018 XenbaseID:XB-GENE-959575 Length:1569 Species:Xenopus tropicalis


Alignment Length:1441 Identity:279/1441 - (19%)
Similarity:436/1441 - (30%) Gaps:528/1441 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PLVLFTALLLVSSTICQGLPDLHKQMTPEQL-QSVFHVDTHDAVPHYELVQ-------------- 53
            ||:|         .||.| ..||:. .|..| :...|:| |.....:|:|:              
 Frog    30 PLLL---------AICHG-TRLHRD-NPHSLHKGQEHLD-HSLPLAFEVVEPVKVDEKGNFLSYN 82

  Fly    54 LQHHENNHNRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLFAPEVSAIKS 118
            |||      ||:||:                   :..|.:..:.|                  |:
 Frog    83 LQH------RRKRSV-------------------ASQAIHYRIHH------------------KT 104

  Fly   119 HNVSFSAFGQHLNLSLRATQGLF---------KGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHT 174
            ||:.|       ||:.|  .|..         .|.....|:     .|...:|..|.......|.
 Frog   105 HNLFF-------NLTFR--DGFLSDNFILERRNGNSSHARI-----SPQLGNGCHLIGTAQRAHV 155

  Fly   175 SNDVGEVFQDEKNMAAILMRRHMETGDLIMEGSIGHDLVIKPLPHELSPNPEESHHIIYKREASA 239
            ...|..:  ...|..|...|  :..||..:|...|...| ...||:         ||||:|::  
 Frog   156 GGGVAAI--SVCNGLAGFFR--LPDGDYFIEPFHGATQV-SGKPHQ---------HIIYQRDS-- 204

  Fly   240 AEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAP-SSPDFEDLNDEDEGALDGEPQVAE--- 300
                                        ..|:||..| |:.||..:||..:..|..|.|..|   
 Frog   205 ----------------------------PHRNRRELPISTGDFCAVNDNSKSVLQQERQREEWER 241

  Fly   301 ----SRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGV-DLRYRLLKGPRIR 360
                .|..|:|......:.|.||:.|......||.:|  |:.|..:..|.| .|.:....|..|.
 Frog   242 KHLNGRKISQRSVSKERWVETLVVADTKMIAYHGSNN--VESYIFTIMNMVTGLFHDPNIGNAIH 304

  Fly   361 ISIAGIIISRGRDATPYLERNRVGRDAIDSA-AALTDMGKYLFRERRL-------PV-YDIAVAI 416
            |.:..:|:         ||....|...:.:| ..|....|:   ::.:       |. :|:||.:
 Frog   305 IKVVRLIL---------LEEEEEGLKIVHNADQTLASFCKW---QKSINPKSDAHPAHHDVAVLL 357

  Fly   417 TKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTG---GFSGIIVAAHEVGH 478
            |:.|:|  .|....|.  |.|.:::.|.|..:|      |..|.||||   .|:    .|||:||
 Frog   358 TRKDIC--ASKNSPCE--TLGLSHLSGMCQPSK------SCNINEDTGLPLAFT----IAHELGH 408

  Fly   479 LLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMS-DLRHTERGFRWSACTVQSFHHFLNGDTATCLH 542
            ..|..|||......:.|        .:.|||| .|::......||.|:.:....||:.....||.
 Frog   409 SFGIQHDGQGNDCEIAG--------RNPYIMSRQLQYNTSPLTWSPCSKEYITRFLDRGWGFCLD 465

  Fly   543 NAP-HEDSALGRSLPGTLLSLDAQCRRDRGTYACFKDE--RVCAQLFCFDAQTGYCVAYRPAAEG 604
            :.| .:|.......||.|..::.||:...|..|.|.:|  .||..|:| ..:.........||:|
 Frog   466 DVPAKKDLKPPIIAPGVLYDVNHQCQLQYGPNATFCEEVDNVCQTLWC-SVKNSCRSKLDSAADG 529

  Fly   605 SACGNGYHCLDGRC-----------------TPLP-----------------SNIIPDYG----- 630
            :.||....|.:|:|                 ||..                 :|..|.:|     
 Frog   530 TRCGESKWCFNGKCINVGTTPQTINGGWGAWTPWSHCSRTCGAGAENAERKCNNPQPKFGGKYCT 594

  Fly   631 ---HNYRL-----------------------------------VYN--------------KIDNK 643
               ..||:                                   :||              ...||
 Frog   595 GERKRYRICNIQPCPKDYPSFREMQCTEFNTVPYKNELYQWIPIYNTENPCELHCRSSSGNFANK 659

  Fly   644 -KDAAEDVESSSEETESQ---------------EDETESVEDQ-----DEGTTSS---------- 677
             .||..|.....|..:|:               |.::.:.||:     .:|::..          
 Frog   660 FLDAVIDGTPCFERNKSRDVCINGICKKVGCDYEIDSNATEDRCGICLGDGSSCQTIKKVFNQTD 724

  Fly   678 -----------EEQEDNKIEQSSAAGG-AAAQSTTTAR------------------STTTTTVRT 712
                       :...|.|||:...||. .|.:|....:                  .|.....|.
 Frog   725 GFGYVDVGLIPKGARDIKIEEVEEAGNFLALRSEDPGKYYLNGAYIIQWNGEYKVAGTIFHYQRN 789

  Fly   713 TSTTTTTAK-PKSKSFGYLHRSLPERQWMQ------DNGVLVTTRISSSVSSSSS---------- 760
            ..|...||. |.::|.           |:|      :.||.....|...|:..:.          
 Frog   790 NDTENITASGPTNESI-----------WIQLLFQEHNPGVRYEYVIQKDVNLENEIESVYTWRYG 843

  Fly   761 -----GSSSGEAAATSTRRPTTTTTTQTPNLF-----QIYTHELR---KQIEYYLHMLQTQQHAT 812
                 .::.|........|..........|.|     |..|.:.:   |:......:.|.||.:|
 Frog   844 GWTDCSATCGTGVQHQISRCVNKKRGVVKNTFCDQEMQPITRQKKCNTKECPPRWWVGQWQQCST 908

  Fly   813 KFQP----------------EQQQQQSQQQQSIVEIPLVQKS------------LTNYSVTS--- 846
            ...|                :::..:|:....:.: |.|..|            ::|:|..|   
 Frog   909 TCGPTGEKKRTVLCLKTSGSDEEALRSEDCHHLTK-PKVYLSCNRDILCPSDWTVSNWSECSVTC 972

  Fly   847 -------------------SSSSTSN-----GAKQ--------QPP------------SNKDENQ 867
                               .||...|     |.:|        :||            .:.|..:
 Frog   973 GGGVRTRNITCAKNNDEPCDSSKKPNSKALCGLQQCYVQKTLPKPPIKYNYRKKIIKKKSGDPKR 1037

  Fly   868 RQQQQQQQAQQQLQDGLP------DEENEATAGIQS-------NE----------------AIER 903
            |.....:..:.|...|||      ...|.::..::|       ||                .:|.
 Frog  1038 RIFLPNKNHRVQTTTGLPRVFMSTSSTNSSSPSVKSIKEDFQINEIPNSTHFNIDYKYNFVLVEN 1102

  Fly   904 QKRKFPTTPTA---ATSAAQKSATPATPATSATSARPTP----TTAKPITTSSFLDAYFKKLQAL 961
            .|||.....|:   :.|...|.....| .|.:.:.:.:|    ||.:|...:|......::.|:.
 Frog  1103 NKRKVHVNATSISPSVSNRTKVGNMET-GTESIAEKDSPPIFTTTRRPEELTSKYQLLTEQPQSQ 1166

  Fly   962 HDAGSASSSTTTTT---TTSVSSSVSS-------ATSSKQQHPQQQQQQQVQQIADGSHFLKRTP 1016
            .::|:...||....   .|.::..:.|       .|:..|.|| .....|.:...:.|..:.:||
 Frog  1167 TESGNMRGSTVDPNGDYDTDINFIIESRSKRHKGKTNQNQNHP-GTNLNQTESPTNSSILINQTP 1230

  Fly  1017 HRSSLKAYKTSSSSSNNSSSQTQQQQQQQQQQYATNYIGDTTNNQPAVLDNSGSASSTTETAKKP 1081
                |..|.|.|.|:...:|....|..:.        :..|.:.||:.|..:.|.:....|.|..
 Frog  1231 ----LSTYNTVSISNTEGNSTRNNQDWRD--------VAPTASAQPSFLQVTTSNTPENSTWKVN 1283

  Fly  1082 KIKTQKLIRRT 1092
            ....:.|:..|
 Frog  1284 NASNRYLLNYT 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 64/242 (26%)
ADAMTS_CR_2 556..619 CDD:465496 21/81 (26%)
adamts12XP_017946319.2 Pep_M12B_propep 65..200 CDD:460254 38/205 (19%)
ZnMc_ADAMTS_like 258..465 CDD:239801 64/242 (26%)
ADAMTS_CR_2 480..544 CDD:465496 20/64 (31%)
TSP1 557..609 CDD:214559 7/51 (14%)
ADAMTS_CR_3 615..713 CDD:437068 13/97 (13%)
ADAMTS_spacer1 715..824 CDD:461796 19/119 (16%)
TSP1_ADAMTS 840..894 CDD:465950 7/53 (13%)
TSP1_ADAMTS 898..952 CDD:465950 9/54 (17%)
TSP1_ADAMTS 960..1008 CDD:465950 7/47 (15%)
TSP1_ADAMTS 1312..1360 CDD:465950
TSP1_ADAMTS 1363..1418 CDD:465950
TSP1_ADAMTS 1421..1467 CDD:465950
TSP1_ADAMTS 1470..1525 CDD:465950
Blue background indicates that the domain is not in the aligned region.

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