DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamtsl4

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_021322467.2 Gene:adamtsl4 / 100333903 ZFINID:ZDB-GENE-070815-2 Length:1089 Species:Danio rerio


Alignment Length:510 Identity:104/510 - (20%)
Similarity:156/510 - (30%) Gaps:154/510 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 GAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSACTVQSF-HHFLNGDTATCLHNA 544
            |...|..||.:     |..||...|           |.:|  .|::|:. ...:|.....|  :|
Zfish   344 GNEQDWRPPVA-----GNYRCSGRD-----------REYR--RCSLQACPGAAVNSRADQC--SA 388

  Fly   545 PHEDSALGRSL---PGTLLSLDAQCRRDRGTYACFKDERVCAQLFCFDAQTGYCVAYRPA---AE 603
            .:....:||..   |.|.:.|:.||                 :|.|  ...||....|.|   .:
Zfish   389 FNAQEFMGRVYDWEPFTEVGLEQQC-----------------ELTC--RPVGYRFYVRQAERVRD 434

  Fly   604 GSACGNGYH---CLDGRCTP------LPSNIIPD-YGHNYRLVYNKIDNKKDAAEDVESSSEETE 658
            |:.|.|...   |:.|||..      |.|.::.| .|         :...:|...:..|.|....
Zfish   435 GTPCANNTPTDVCVGGRCLSEGCDGVLGSGLVRDRCG---------VCGGEDGTCERVSGSFMNT 490

  Fly   659 SQEDETESVEDQDEGTTSSEEQEDNKIEQSSAAGGAAAQSTTTARSTTTTTVRTTSTTTTTAKPK 723
            |.......:.|...|.|:....|........|......||....|....                
Zfish   491 SVPLGYHKILDIPPGATAINITERRASPNYLALRSGTGQSVVNGRWAVD---------------- 539

  Fly   724 SKSFGYLHRSLPERQWMQDNGVLVTTRISSSVSSSSSGSSSGEAAATSTRRPTTTTTTQTPNLFQ 788
                       |..::.......:.||  ........|...||         |.|....|..|.|
Zfish   540 -----------PPGEYQAGGAAFLYTR--PKAEPQEPGEDRGE---------TLTAAGPTTALLQ 582

  Fly   789 IYT--HELRKQI--EYYLHMLQTQQHATKFQPEQQQQQSQQQQS-----IVEIPLVQKSLTNYSV 844
            :|.  |.....|  |||:.:.:.:...|:...|:::.:|..:::     .||.|:....::: |.
Zfish   583 LYIIFHRQNPGIDYEYYIPVDKRRDGETEVLRERERGRSALRETTGVSMAVENPVAPPPVSS-SF 646

  Fly   845 TSSSSSTSNGAKQQPPSNKDENQRQQQQQQQAQQQLQ-------DGLP------DEENEATA--- 893
            .|||||:|:.:.:.||    |..|.|........::.       |.||      ....|.||   
Zfish   647 PSSSSSSSSSSDRWPP----ERPRPQGLGPNRNARIPPRTDLPLDNLPVFVWRRGALTECTATCG 707

  Fly   894 -GIQSNEAI--------ERQKRKFPTTPTAATSAAQKSATPATPATSATSARPTP 939
             |.|..|.:        |..:|:.            .|||..||.....:..|.|
Zfish   708 KGSQYREIVCVNRHTEQEVHERRC------------DSATKPTPEEEPCNVHPCP 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 14/61 (23%)
ADAMTS_CR_2 556..619 CDD:465496 17/68 (25%)
adamtsl4XP_021322467.2 None

Return to query results.
Submit another query.