DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and LOC100002059

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_001341935.2 Gene:LOC100002059 / 100002059 -ID:- Length:935 Species:Danio rerio


Alignment Length:551 Identity:127/551 - (23%)
Similarity:209/551 - (37%) Gaps:130/551 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 SAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNM 188
            :||.|...|:|.......  ||......|  |.|:|..|.:|:...:.       |::..|..:.
Zfish    55 NAFNQEFYLTLLPDSSFL--APDDTFQDT--SSPSALSGDELRRCFYS-------GDINADMNSY 108

  Fly   189 AAILMRRHMETGDLIMEGSIGHD----LVIKPLPHELSPNPEESHHIIYKREASAAEGQLSDFAF 249
            ||:.:     .|.  :.|:..::    ::.:....||..:.....|:|.::..:|.  .||....
Zfish   109 AALSL-----CGG--VRGAFSYNGMEYIIERRTAPELISDDAGKTHVIRRKNLNAP--NLSKCGV 164

  Fly   250 MEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIY 314
            ....:::  |.|::.:..:..::....:                    :..|.:||:|.|....|
Zfish   165 TSNQEVV--ESLDKYKHLKGHTKNLTET--------------------LLRSMSRSKRFASIPRY 207

  Fly   315 PEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGP----RIRISIAGIIISRGRDAT 375
            .||||:.|....:.||.|   :|.|.::.   :.:..:|.|.|    .|.|.:..:|:....:..
Zfish   208 VEVLVVADESMAKFHGDD---LKHYLLTL---LSVTAKLYKHPSILNAISIVVVKLIVINEAEKG 266

  Fly   376 PYLERNRVGRDAIDSAAALTDMGKYLFRERRL-------PVY-DIAVAITKLDMCRRTSAYGECN 432
            |          .:.|.|||| :..:...:::|       |.| |.|:..||.|:|..|:    |:
Zfish   267 P----------KVSSNAALT-LRNFCTWQKKLNKVNDKHPEYWDTAILFTKQDLCGATT----CD 316

  Fly   433 RGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPG 497
              |.|.|.||..|      :...|.::||| .|.......|||:||:....||           .
Zfish   317 --TLGMADVGTMC------DPKRSCSVIED-DGLPSAFTTAHELGHVFSMPHD-----------N 361

  Fly   498 AQRC-----RWEDGYIMSDL-----RHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALG 552
            .:.|     :.:|.::||..     .||.    ||.|:......||:.....||.:.|.:..||.
Zfish   362 VKACEDVFGKLKDNHMMSPTLIQIDHHTP----WSVCSAAIITDFLDSGHGDCLLDQPQKLMALP 422

  Fly   553 RSLPGTLLSLDAQCRR--DRGTYACFKDERVCAQLFCFDAQTGYCVA---YRPAAEGSACGNGYH 612
            ...||...||..||..  ..|:..| ...:.|::|:|.....|..|.   :.|.|:|:|||....
Zfish   423 EDPPGISYSLGRQCELAFGSGSKPC-PYMQACSKLWCTGKAKGQLVCQTRHFPWADGTACGTNKL 486

  Fly   613 CLDGRCTPLPSNIIPDYGHNYRLVYNKIDNK 643
            |..|.||           .......||:|.:
Zfish   487 CYRGTCT-----------EKQNTFKNKVDGR 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 64/250 (26%)
LOC100002059XP_001341935.2 Pep_M12B_propep 48..149 CDD:279848 22/111 (20%)
Reprolysin 206..415 CDD:279729 65/253 (26%)
ZnMc_ADAMTS_like 206..412 CDD:239801 64/250 (26%)
ADAM_CR 426..495 CDD:301627 23/80 (29%)
TSP1 507..558 CDD:214559 127/551 (23%)
ADAM_spacer1 669..785 CDD:283607
TSP1 829..880 CDD:214559
TSP1 882..935 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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