DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5532 and AT1G50740

DIOPT Version :9

Sequence 1:NP_001286781.1 Gene:CG5532 / 37761 FlyBaseID:FBgn0034902 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_564579.1 Gene:AT1G50740 / 841496 AraportID:AT1G50740 Length:119 Species:Arabidopsis thaliana


Alignment Length:113 Identity:32/113 - (28%)
Similarity:52/113 - (46%) Gaps:14/113 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPR-------PLLQLGTSL 63
            |...|...:..||.:||.|.|||.||..|...|.|:.....::.:...:       .||:...:.
plant     6 FTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAA 70

  Fly    64 FLAGLMGARWNRSGKLMPAGMVCMLSVAAL-----VKNLATYNRYLMP 106
            .|..:||.|:.::.|:|||.:|.  .::||     |..:||...::.|
plant    71 ALTFVMGQRFLQTQKIMPAALVA--GISALMTCFYVYKIATGGNHIPP 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5532NP_001286781.1 Tmemb_14 5..94 CDD:281626 28/99 (28%)
AT1G50740NP_564579.1 Tmemb_14 5..101 CDD:397626 28/96 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4213
eggNOG 1 0.900 - - E1_KOG4267
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 51 1.000 Inparanoid score I2627
OMA 1 1.010 - - QHG55327
OrthoDB 1 1.010 - - D1642026at2759
OrthoFinder 1 1.000 - - FOG0000753
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102546
Panther 1 1.100 - - O PTHR12668
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X790
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

Return to query results.
Submit another query.