DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5532 and AT3G57280

DIOPT Version :9

Sequence 1:NP_001286781.1 Gene:CG5532 / 37761 FlyBaseID:FBgn0034902 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_567046.1 Gene:AT3G57280 / 824895 AraportID:AT3G57280 Length:226 Species:Arabidopsis thaliana


Alignment Length:110 Identity:29/110 - (26%)
Similarity:42/110 - (38%) Gaps:26/110 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLGTSLFLAGLMG 70
            ||..|...|.:||::|:|.:.::.||..|:.:|                     |..|.|:.|..
plant   105 FGIPYGGLVVSGGLLGFAFSRNLTSLSTGVLYG---------------------GGLLALSTLSL 148

  Fly    71 ARWNRSGKLMP--AGMVCMLSVAALVKNLATYN--RYLMPAGTKA 111
            ..|.......|  .|. .:||.....||...|:  :.|.|||..|
plant   149 KIWREGKSSFPYILGQ-AVLSAVVFWKNFTAYSMTKKLFPAGVFA 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5532NP_001286781.1 Tmemb_14 5..94 CDD:281626 21/89 (24%)
AT3G57280NP_567046.1 Tmemb_14 104..200 CDD:397626 29/110 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4267
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000753
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12668
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.