DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12491 and CG11300

DIOPT Version :9

Sequence 1:NP_611824.1 Gene:CG12491 / 37759 FlyBaseID:FBgn0034900 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_611825.1 Gene:CG11300 / 37760 FlyBaseID:FBgn0034901 Length:157 Species:Drosophila melanogaster


Alignment Length:165 Identity:66/165 - (40%)
Similarity:93/165 - (56%) Gaps:19/165 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPEFVLAFGLVVLVATVY-------GGTDSSSSDSSSSTSPTSNSSTPSTSSSSSTPSSSSSTS 58
            ||.:||:||||:.|:||.|       |...:||..:.:.|||...:.||        ||.|.:|.
  Fly     1 MRCQFVIAFGLLALIATAYADSPPAAGSPPASSPPAGTPTSPPPATGTP--------PSPSPATG 57

  Fly    59 TPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSDTSSSSTSSDSEEVDRLRRRLRRL 123
            ||.|.|..:.:.::|:.::.|..:.:|....|::|:|:|.:..|.|.:|| |:||.|||||||||
  Fly    58 TPPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTSPSDSGSSS-SQEVIRLRRRLRRL 121

  Fly   124 RRLRRQERRQEIRRERQQERRQQSRAGRR--RQRR 156
            ||..|:|||| ..:..|.....|.|..||  |.||
  Fly   122 RRQLRRERRQ-ANQSNQNGGGGQGRVVRRVHRHRR 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12491NP_611824.1 None
CG11300NP_611825.1 Pacs-1 <3..>75 CDD:287256 27/79 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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