DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13560 and plvapa

DIOPT Version :10

Sequence 1:NP_611823.2 Gene:CG13560 / 37758 FlyBaseID:FBgn0034899 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_001108049.1 Gene:plvapa / 100136858 ZFINID:ZDB-GENE-070912-432 Length:580 Species:Danio rerio


Alignment Length:104 Identity:49/104 - (47%)
Similarity:57/104 - (54%) Gaps:5/104 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLIAILATAYAGGDT---TGTGSTGTDTTGTGSTGTGSTGTGSTGSTGTGSTGT-GSTGSTGTGS 70
            |:...|.|...|..|   ||.|..|:..||...|||.|.|....|.||.||.|: .|||:|||||
Zfish   450 GVTGPLNTPLGGTGTLPSTGLGGPGSSRTGPTQTGTSSFGGAGLGLTGLGSAGSFPSTGNTGTGS 514

  Fly    71 TGTGSTGSTGTGSTGSTATGSTGSTGSTTSGSPSTSTGS 109
            |..||.||:|.| .|..|||..||.||..:|..:||.|:
Zfish   515 TAFGSAGSSGVG-VGKPATGGFGSVGSNPTGFGATSGGA 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13560NP_611823.2 None
plvapaNP_001108049.1 PV-1 26..407 CDD:461970
PPE <373..560 CDD:444372 49/104 (47%)
Blue background indicates that the domain is not in the aligned region.

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