DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egl and Exd1

DIOPT Version :9

Sequence 1:NP_001286779.1 Gene:egl / 37757 FlyBaseID:FBgn0000562 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001101231.1 Gene:Exd1 / 311334 RGDID:1561009 Length:562 Species:Rattus norvegicus


Alignment Length:545 Identity:116/545 - (21%)
Similarity:205/545 - (37%) Gaps:152/545 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 QRINTLVIRTLAENLEKDKQSLANQQGGPISPHASPVHSIANSSSNQNAGSAANNANSNSNANPN 506
            :::|::.|.|....:||.|:...|     :...|||...:..||.                  .:
  Rat    80 EKVNSVSINTERAGMEKMKKEDLN-----VCEPASPAPEVPTSSL------------------LS 121

  Fly   507 NANHSPSHSYFVGDTWKIKVLQNTTVIANVKQSVFVTDIILKYAA-----KNESIVVSLDCEGIN 566
            :..:.||....|          ..|||...:|         |:.|     |.:| |:|:..||.|
  Rat   122 DLKYCPSEEEEV----------TYTVIDQFQQ---------KFGAAMLHIKKQS-VLSVAAEGAN 166

  Fly   567 LGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHDCRNDAANLYLQFGI 631
            :...|::..::: .|....:|||:....:...:.||:.:||..:::|||||||..:..|..|:||
  Rat   167 VCRHGKLCWLQV-ATNSRVYLFDIFLLGSRAFNNGLQMILEDKRILKVIHDCRWLSDCLSHQYGI 230

  Fly   632 LLRNVFDTQAAHAILQYQESGKQVYKAKYISLNSLCEQYNAPCNP-----IKDQLKQIYRRDQKF 691
            :|.||||||.|..:....|:|.  :....||....|...:....|     ::::.||| :.:.:.
  Rat   231 MLSNVFDTQVADVLQFSMETGG--FLPNCISTLQECLIRHLKVAPKYLLFLEERQKQI-QENPEV 292

  Fly   692 WAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIKPENRALFSELCTE-QILMQIKPNEVKIRKK 755
            |..|||...::...|.:...|:             |....|..|:.:: ..|:....|..:....
  Rat   293 WLTRPLPPSLLKILALETAYLL-------------PLRLVLLDEVMSDLTTLVDAYLNTYRDGSA 344

  Fly   756 QRKVSTEVSDLKQKLAQTSKSIVLSNREIRLLRYMDLTEDEKERLKGYYKV-------------- 806
            .|...||.:.::              ....||:..|..:..:||....|:|              
  Rat   345 DRLAGTEPACME--------------LPAELLQLQDFQKQRRERAAKEYRVNAQGLLIRTLLHPK 395

  Fly   807 ---AKKLEKME---------SAG----------NPSKDQS--DSEDEQEPNENDAFP----SLDS 843
               |:.:.|.|         ::|          :..||::  |.|.:|...::...|    ...|
  Rat   396 EPGARTVGKEEHIQGFLFCKTSGVDRVPRFICHDSHKDENYLDKESKQTTEKSQIVPPWKEGEKS 460

  Fly   844 VPSDNSLSGTFSPRFSSEPP--------SLTESMQMLEEILQNKSMDRIARIDKLEAILTTATSL 900
            .|.....:|:..||..|.||        ||.|.::.| .:::||            ..||::.  
  Rat   461 KPVCGEPAGSEDPRAQSLPPRQAFQSQFSLKEEIEQL-LLVENK------------GALTSSN-- 510

  Fly   901 PCEQIIASNSMQEQLGSSIATTENL 925
              |..:.|.|:.::...:.:.:.:|
  Rat   511 --EDTLVSPSLSQEAWEAPSESSHL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eglNP_001286779.1 Egl_like_exo 541..744 CDD:99851 56/213 (26%)
Exd1NP_001101231.1 Egl_like_exo 146..344 CDD:99851 56/215 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344855
Domainoid 1 1.000 65 1.000 Domainoid score I9826
eggNOG 1 0.900 - - E1_KOG2405
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003633
OrthoInspector 1 1.000 - - oto95526
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.790

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