DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egl and exd1

DIOPT Version :9

Sequence 1:NP_001286779.1 Gene:egl / 37757 FlyBaseID:FBgn0000562 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_002939597.3 Gene:exd1 / 100489477 XenbaseID:XB-GENE-993341 Length:493 Species:Xenopus tropicalis


Alignment Length:553 Identity:105/553 - (18%)
Similarity:177/553 - (32%) Gaps:197/553 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 PSANTCYG---------------PINNSSQQTQQVQTQQQQQPQHAT--QNPAEQRLNSVNQTLK 441
            |.|...:|               |:..|.:||.:.:.|...:..|..  ...||:..:...:...
 Frog    55 PGAQLLFGYTILNVELQKDLEEVPVKQSEEQTTEEREQAPTEQDHIDDGSQDAERTQSDTGKPQD 119

  Fly   442 QRINTLVIRTLAENLEKDKQSLANQQGGPISPHASP-VHSIANSSSNQNAGSAANNANSNSNANP 505
            .|..||.:..|:.:.|:.:.::.:|    ..|...| :|.:.|..                    
 Frog   120 LRTRTLQVIKLSVDEEEVEYTIIDQ----FQPIFGPAIHHLQNQK-------------------- 160

  Fly   506 NNANHSPSHSYFVGDTWKIKVLQNTTVIANVKQSVFVTDIILKYAAKNESIVVSLDCEGINLGLK 570
                                                               |:|:...|.|:...
 Frog   161 ---------------------------------------------------VISIGAVGQNICRH 174

  Fly   571 GEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHDCRNDAANLYLQFGILLRN 635
            |:::.::. .|:...:||||....:.|...||:.|||...::|||||||.....|..|:||:|.|
 Frog   175 GKLSWLQF-ATKSRVYLFDVLVLGSKVFKNGLQMVLEDTGILKVIHDCRWLGDILSYQYGIILNN 238

  Fly   636 VFDTQAAHAILQYQESG---------KQVYKAKYISLNSLCEQYNAPCNPIKDQLKQIYRRDQKF 691
            |||||.....|...|:|         .:.....::|:......:.|...|:.::...|       
 Frog   239 VFDTQVGDVYLFSMETGGFLPHRIRTLEECLIHHLSMLPSRVSFLAHKLPLTEEYDDI------- 296

  Fly   692 WAKRPLTREMMLYAAGDVLVLIHDQLFGNLARQIKPENRALFSELCTEQILMQIKPNEVKIRKKQ 756
            |..||:...::...:.:|:.|:             |...|:...:..:..|:             
 Frog   297 WFDRPMDPTLLKLLSLEVIHLL-------------PLRSAMLDAMLADFTLL------------- 335

  Fly   757 RKVSTEVSDLKQKLAQTSKSIVLSN----REIRLLRYMDLTEDEKERLKGYYKVAKKL---EKME 814
              |...::..::..|...:|..:|.    :|::.||.:.....|| .||.|....|.|   .|.|
 Frog   336 --VEGYLNAFRRGTANILESSEVSGSGLPKELQQLRVLQQMRREK-ALKEYDVNNKGLLTRGKAE 397

  Fly   815 SA--GNPSKDQSDSEDE--------------------------QEPNEN---DAFPSLDSVPSDN 848
            .|  ..||..:.|:|.|                          ||.|..   ..||         
 Frog   398 KAPQSKPSITKHDTEPENAVKLTMKSEESLYQTMATSATHLENQEKNHGALCQNFP--------- 453

  Fly   849 SLSGTFSPR-----FSSEP-----PSLTESMQM 871
             :...|.||     ...:|     |||..:::|
 Frog   454 -VRSNFCPRGPCDSLKPQPLRPPLPSLVANLRM 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eglNP_001286779.1 Egl_like_exo 541..744 CDD:99851 49/211 (23%)
exd1XP_002939597.3 Egl_like_exo 150..348 CDD:99851 53/304 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003633
OrthoInspector 1 1.000 - - oto102267
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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