DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and pnp5a

DIOPT Version :9

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_998476.1 Gene:pnp5a / 791647 ZFINID:ZDB-GENE-040426-2553 Length:293 Species:Danio rerio


Alignment Length:290 Identity:106/290 - (36%)
Similarity:165/290 - (56%) Gaps:15/290 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YPFEEVEAMAKYIVNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDGIEPDCS--FV 107
            |.||:.:|.|.::::.:.:||..|::|||.|..:...::..|...|.||||||.......:  .|
Zfish     9 YSFEDCQATADWLLSQTAVRPLVGIVCGSGLGGLADALKDQVAFNYRDIPNFPQSTVHGHAGRLV 73

  Fly   108 LGTVMGAPIIALVHSFHSCDGYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALGDIMLVQD 172
            .||:.|.|.:.:...||..:||.:....:|:|:.::.||.|::||:.|..::..:.:||||:::|
Zfish    74 FGTLKGRPCVCMQGRFHLYEGYPIQKITMPMRIFKMLGVETVILTNAAGGLNQDYKVGDIMIIKD 138

  Fly   173 HINVVGMMHQTPLEGPSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHSGVLACMGGPI 237
            |:|:.|.....||.|.:|.|||.|...|.:|||::|.:.||::|..:|...||..||...:|||.
Zfish   139 HLNMPGFAGNNPLAGHNDERFGVRFPCMSDAYDRELQQMALDVGSELGFSDFLREGVYCVLGGPS 203

  Fly   238 LGTVAEERMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAF-VVISRAASDKESEESDKDKEKDTDR 301
            ..|:||.|||..:...|||||.|.|||.|.|.|::|.|. ::.::|..|.:|||  |...::..:
Zfish   204 FETIAECRMLHKLGADAVGMSTVHEVIVARHCGMRVFALSLITNKAVMDYDSEE--KANHEEVLQ 266

  Fly   302 DSKQDKREQDSQEPVPLPRLQACSDLIGRL 331
            ..|| :.||       |.||  .|.:|.||
Zfish   267 TGKQ-RAEQ-------LERL--VSTIITRL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP_UDP_1 46..280 CDD:294213 88/236 (37%)
XapA 50..280 CDD:223084 86/232 (37%)
pnp5aNP_998476.1 PRK08202 11..286 CDD:236183 103/286 (36%)
XapA 15..286 CDD:223084 101/282 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0005
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58962
OrthoDB 1 1.010 - - D1078969at2759
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.890

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