DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and pnp4a

DIOPT Version :10

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001002102.1 Gene:pnp4a / 415192 ZFINID:ZDB-GENE-040625-83 Length:291 Species:Danio rerio


Alignment Length:247 Identity:85/247 - (34%)
Similarity:138/247 - (55%) Gaps:6/247 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EEVEAMAKYIVNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDGIEPDCS--FVLGT 110
            |:.:..|.::::.:..|||..:||||.|..:...::......|.|||.||.......:  .|.|.
Zfish    10 EDYQRAADWLLSQTQHRPKVAIICGSGLGMLADGLKCQDSFKYSDIPGFPQSTVKGHAGRLVFGE 74

  Fly   111 VMGAPIIALVHSFHSCDGYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALGDIMLVQDHIN 175
            :.|...:.:...||..:|::|:....||||.:|.||.|:::|:.|.::...:..||||:::||||
Zfish    75 LKGKTCVCMQGRFHMYEGHSLSKVTFPVRVFKLLGVDTLIVTNAAGSLADSYNCGDIMIIRDHIN 139

  Fly   176 VVGMMHQTPLEGPSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHSGVLACMGGPILGT 240
            ..|:....||.||:|.:||.|...|...||:.|.:.||:|.|.||:.:::..||...:|||...:
Zfish   140 FPGLAGLNPLNGPNDEKFGPRFPPMSGVYDRGLRKMALDICKGMGVSQYVQEGVYCMVGGPNFES 204

  Fly   241 VAEERMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAFVVIS----RAASDKES 288
            :||.|:|..:.|.|||||..|||:.|.|.|::|....:|:    ::..|.|:
Zfish   205 IAEARLLHRLGVDAVGMSTAPEVLVASHCGIRVFGLSLITNKVVKSYEDNET 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP-EcPNPII_like 48..290 CDD:350160 85/247 (34%)
pnp4aNP_001002102.1 PNP-EcPNPII_like 10..281 CDD:350160 85/247 (34%)

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