DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and mtap

DIOPT Version :9

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_956848.1 Gene:mtap / 393526 ZFINID:ZDB-GENE-040426-1505 Length:280 Species:Danio rerio


Alignment Length:294 Identity:69/294 - (23%)
Similarity:113/294 - (38%) Gaps:53/294 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SHIRPKYGLICGSFLSD---MVSLVEQPVVIPYEDIPNFPDGIEPDCSFVLGTVMGAPIIALV-- 120
            ||:  |.|:|.||.|.|   :....|:.||.||.         :|..:.:||.:.....:.|.  
Zfish     5 SHV--KIGIIGGSGLDDPDILEGRTERYVVTPYG---------KPSDALILGKIKNVDCVLLARH 58

  Fly   121 ---HSFHSCD-GYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALGDIMLVQDHINVVGMMH 181
               |:....: .|.....||...     |...:::|:...::......|||:|:...|:......
Zfish    59 GRQHTIMPTNVNYQANIWALKEE-----GCTHLLVTTACGSLREDIQPGDIVLIDQFIDRTTKRV 118

  Fly   182 QTPLEG-PSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHS-GVLACMGGPILGTVAEE 244
            ||..:| |:.|. |.....|...:.....|..||:.:.:|::  .|: |.:..:.||...:.||.
Zfish   119 QTFYDGQPTSPP-GVCHIPMAEPFCSKTREVLLEVAQGLGVK--CHTRGTMVTIEGPRFSSRAES 180

  Fly   245 RMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAFVVISRAASDKESEES------------DKDKEK 297
            .|.|......:.|:.||||:.|...||...:..:.:.....||.||:            :.:|..
Zfish   181 LMFRQWGADVINMTTVPEVVLAKEAGLCYASIAMATDYDCWKEHEEAVCVDNVLKTMKENANKAS 245

  Fly   298 -----------DTDRDSKQDKREQDSQEPVPLPR 320
                       ..|.||..:..:..||..|.||:
Zfish   246 SILLTAIPQICQMDWDSTINAHKSMSQSSVMLPK 279

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP_UDP_1 46..280 CDD:294213 56/229 (24%)
XapA 50..280 CDD:223084 56/229 (24%)
mtapNP_956848.1 PNP_UDP_1 7..255 CDD:294213 59/266 (22%)
XapA 7..255 CDD:223084 59/266 (22%)