DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and pnp-1

DIOPT Version :9

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001368342.1 Gene:pnp-1 / 176851 WormBaseID:WBGene00019298 Length:318 Species:Caenorhabditis elegans


Alignment Length:270 Identity:86/270 - (31%)
Similarity:142/270 - (52%) Gaps:14/270 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FEEVEAMAKYI---VNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDG--IEPDCSF 106
            :::|.::|..|   |.....|...|:||||.|..:...|:...::||..||.||..  :....:.
 Worm    39 YDDVLSVAASIREQVGEDVARADLGIICGSGLGPIGDTVQDATILPYSKIPGFPTTHVVGHKGNM 103

  Fly   107 VLGTVMGAPIIALVHSFHSCD-GYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALGDIMLV 170
            :.|.:.|..::.|...||..: ..:||.|.||||||...|::.:::::.|..::.....||:||:
 Worm   104 IFGKLGGKKVVCLQGRFHPYEHNMDLALCTLPVRVMHQLGIKIMIVSNAAGGINAVLRHGDLMLI 168

  Fly   171 QDHINVVGMMHQTPLEGPSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHSGVLACMGG 235
            :|||.:..:...:||.|.:|||||:|..|:.:||||.|.:.|:::|:|..:.  |:.||....||
 Worm   169 KDHIFLPALAGFSPLVGCNDPRFGARFVSVHDAYDKQLRQLAIDVGRRSDMT--LYEGVYVMSGG 231

  Fly   236 PILGTVAEERMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAFVVISRAASDKESEESDKDKEKDTD 300
            |...:.||..:.:|:...|:|||...||..|...|:|||.|.:|:..|:      .|.|...:..
 Worm   232 PQYESPAEVSLFKTVGADALGMSTCHEVTVARQCGIKVLGFSLITNIAN------LDADASVEVS 290

  Fly   301 RDSKQDKREQ 310
            .:...|..:|
 Worm   291 HEEVMDIAQQ 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP_UDP_1 46..280 CDD:294213 80/238 (34%)
XapA 50..280 CDD:223084 80/235 (34%)
pnp-1NP_001368342.1 PNPH 61..314 CDD:273764 81/248 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159307
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S669
OMA 1 1.010 - - QHG58962
OrthoDB 1 1.010 - - D1078969at2759
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 1 1.000 - - otm14194
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.910

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