DRSC/TRiP Functional Genomics Resources

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Protein Alignment sigmar and tnfaip8l2b

DIOPT Version :10

Sequence 1:NP_726358.2 Gene:sigmar / 37751 FlyBaseID:FBgn0034894 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_956668.1 Gene:tnfaip8l2b / 393345 ZFINID:ZDB-GENE-040426-1359 Length:186 Species:Danio rerio


Alignment Length:183 Identity:79/183 - (43%)
Similarity:126/183 - (68%) Gaps:0/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FKSHDIGLRAQKKILSRMATKNIAKTFIDGTTASLLDNLYRLCKMHTGNKAKAEKLIKNIIKIVI 92
            |.|.|:.|:|||||||:||||::.:..||.|::.:||.|||:.|.:|||:::|:|::|::||:|:
Zfish     4 FSSKDMALKAQKKILSKMATKSMVQMIIDDTSSEILDELYRVSKEYTGNRSEAQKVVKDLIKVVV 68

  Fly    93 KIGVLHRNNQFSDEELQKAELFKRKFQNTQLSIISFYEVDFTFDLPYLQKSIAESQVALKSIVQP 157
            |||||.|:|:|::|||:.|:.|::|.:...::.|||:|||||||...:...:.||:..|..:|..
Zfish    69 KIGVLFRHNRFNEEELKLAQNFQKKLRQGAMTAISFHEVDFTFDKTVMSDILTESRDMLLKLVNT 133

  Fly   158 HLTEKSLGRIDEVFDFFGEEALLETAFRPDSPYREVMGKIVADINAAMETGDI 210
            |||.||.|||:.||:.:.:..||...:....|.:..:.||...:|..:|.|.:
Zfish   134 HLTTKSHGRINHVFNHYADPELLTQLYNSSGPLKPHLNKICNGLNKLLENGTL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sigmarNP_726358.2 DUF758 49..208 CDD:461672 63/158 (40%)
tnfaip8l2bNP_956668.1 DUF758 25..184 CDD:461672 63/158 (40%)

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