DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL43 and mrpl-34

DIOPT Version :9

Sequence 1:NP_523828.1 Gene:mRpL43 / 37750 FlyBaseID:FBgn0034893 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_492686.1 Gene:mrpl-34 / 182876 WormBaseID:WBGene00007712 Length:189 Species:Caenorhabditis elegans


Alignment Length:160 Identity:61/160 - (38%)
Similarity:96/160 - (60%) Gaps:1/160 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SGFPRAPLQNGLGRYVCQLQRITLKFCKNNGSSRGMRDFIENHLLDFAKENPGIVVYVKPRRHRT 74
            |.|.:.|..||:.||..||.|||::|||.:.||.|:|:||||.|::..::||.:|:|.:|.|:..
 Worm    27 SDFLKIPAYNGISRYTNQLHRITVRFCKQSESSVGVRNFIENQLVEIGRKNPSVVIYAQPVRNSN 91

  Fly    75 PVLVGEYLNGEREWMSCRNSTQEEISKWIDLLKTQNGSSSSLRLRKMWHTEVPSIQGPWTPFLLR 139
            |.:..||.||....::.:|.||:|:||.:.||.:::| ...::|.......||||||.|||....
 Worm    92 PSIRAEYGNGRTLQINAKNMTQDEVSKDVHLLFSRSG-EPVVKLESRQSALVPSIQGQWTPITWL 155

  Fly   140 SPDAQGQAYPSAEASKPLDTPQTATEKLIE 169
            ..:...:..|:.:.||...|..:|||.:::
 Worm   156 PTEMNTEQLPAKQFSKHKSTATSATEYILQ 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL43NP_523828.1 L51_S25_CI-B8 40..109 CDD:197984 28/68 (41%)
mrpl-34NP_492686.1 L51_S25_CI-B8 57..123 CDD:197984 26/65 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166921
Domainoid 1 1.000 47 1.000 Domainoid score I8136
eggNOG 1 0.900 - - E1_KOG3445
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41847
Inparanoid 1 1.050 120 1.000 Inparanoid score I3343
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48937
OrthoDB 1 1.010 - - D1620056at2759
OrthoFinder 1 1.000 - - FOG0004381
OrthoInspector 1 1.000 - - oto20837
orthoMCL 1 0.900 - - OOG6_103158
Panther 1 1.100 - - LDO PTHR21396
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1159
SonicParanoid 1 1.000 - - X4758
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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