DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment angel and Lrrc27

DIOPT Version :9

Sequence 1:NP_477204.1 Gene:angel / 37748 FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_081440.1 Gene:Lrrc27 / 76612 MGIID:1923862 Length:523 Species:Mus musculus


Alignment Length:65 Identity:20/65 - (30%)
Similarity:35/65 - (53%) Gaps:9/65 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LEHLFLYVGIPHEFLSWQRRQQNLLREL----LKLDPDILCLQEMQFDHLPVLVQRLRMGNGKKL 142
            |.||..:..||:  |.....|:|||||:    .:|.|::..| :::::.:.||...:  |:.|.|
Mouse    66 LRHLGKFFKIPN--LQQLHLQRNLLREIPEDFFQLLPNLTWL-DLRYNKIKVLPSGI--GSHKHL 125

  Fly   143  142
            Mouse   126  125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:294334 20/65 (31%)
Lrrc27NP_081440.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
LRR 1 55..76 3/9 (33%)
leucine-rich repeat 58..77 CDD:275378 4/10 (40%)
LRR_8 77..135 CDD:338972 15/54 (28%)
LRR 2 77..98 7/22 (32%)
leucine-rich repeat 78..101 CDD:275378 8/22 (36%)
LRR 3 101..122 4/23 (17%)
leucine-rich repeat 102..124 CDD:275378 4/24 (17%)
LRR 4 124..145 1/2 (50%)
leucine-rich repeat 125..147 CDD:275378 1/1 (100%)
LRR 5 147..168
leucine-rich repeat 148..159 CDD:275378
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..236
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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