DRSC/TRiP Functional Genomics Resources

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Protein Alignment angel and Cnot6l

DIOPT Version :10

Sequence 1:NP_477204.1 Gene:angel / 37748 FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_006250770.1 Gene:Cnot6l / 360917 RGDID:1309128 Length:555 Species:Rattus norvegicus


Alignment Length:388 Identity:100/388 - (25%)
Similarity:152/388 - (39%) Gaps:115/388 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RRWTSLGNQAEGRD---PHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLREL 109
            |.|.:|    :.||   |  .:||.|:.||:|........|:.|  .|...|:|:.|::.::.|:
  Rat   172 RPWITL----KERDQILP--SASFTVMCYNVLCDKYATRQLYGY--CPSWALNWEYRKKGIMEEI 228

  Fly   110 LKLDPDILCLQEMQFDH-----LPVLVQRLRMG--NGKKLAYVYKKKTGCRTDGCAIVYDSSKFE 167
            :..|.||:.|||::.:.     ||.|..|...|  :.|..|.:..::.....|||||.:.:.||.
  Rat   229 VNWDADIISLQEVETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFT 293

  Fly   168 LLDHQAVEL-------YDQAVALLNR----DNVALFARFRFKKQ----------QEQQKEFVVAT 211
            |:....||.       .|.:.|:|||    ||:.:.......|:          ...::..:||.
  Rat   294 LVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVAN 358

  Fly   212 THLLFNTKRSDVRCAQ-------VERILEELQS-------FSTDTPIVLTGDFNSLPDSSPIEFL 262
            .|:.::.:.|||:..|       |:.|||:..|       .....|:||..|.||||||..:|:|
  Rat   359 AHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYL 423

  Fly   263 --------------------------VGKNGDVDSTACPEPLHFEIIDSGEGTASTYQNEWV--- 298
                                      .||||..:..          |..|....|.|:|..:   
  Rat   424 SNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGR----------ITHGFQLKSAYENNLMPYT 478

  Fly   299 --------IVDYILRS------LGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYAL 347
                    ::|||..|      ||     .|.||....|.. |...|.   |:..:.|||::|
  Rat   479 NYTFDFKGVIDYIFYSKTHMNVLG-----VLGPLDPQWLVE-NNITGC---PHPHIPSDHFSL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:469791 92/363 (25%)
Cnot6lXP_006250770.1 LRR <38..>138 CDD:443914
leucine-rich repeat 38..57 CDD:275378
leucine-rich repeat 58..80 CDD:275378
leucine-rich repeat 81..103 CDD:275378
leucine-rich repeat 104..126 CDD:275378
leucine-rich repeat 127..138 CDD:275378
Deadenylase_CCR4b 191..538 CDD:197339 92/363 (25%)
Blue background indicates that the domain is not in the aligned region.

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