DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment angel and Noct

DIOPT Version :9

Sequence 1:NP_477204.1 Gene:angel / 37748 FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_612535.1 Gene:Noct / 310395 RGDID:1587344 Length:428 Species:Rattus norvegicus


Alignment Length:312 Identity:89/312 - (28%)
Similarity:142/312 - (45%) Gaps:49/312 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CSS----FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEMQ-- 123
            |||    .:|:.:||||| .|.|....:|..|.|.|.|:.|:..:|.|:|...||||||||:.  
  Rat   133 CSSSHPPIRVMQWNILAQ-ALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHY 196

  Fly   124 FDHLPVLVQRLRMGNGKKLAYVYKKKTGC-------RTDGCAIVYDSSKFELLDHQAVELYDQAV 181
            ||....|:.||    |.:..:..|..:.|       ..||||:.:..|:|:|::...:.|   ..
  Rat   197 FDTFQPLLSRL----GYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIRL---TA 254

  Fly   182 ALLNRDNVALFARFRFKKQQEQQKEFVVATTHLLFNTKRSDVRCAQVERILEELQSFS--TDTPI 244
            ..|..:.||:......|   |..::|.:|.|||...|.....|.||...:|:.||:.:  ...|:
  Rat   255 MTLKTNQVAIAQTLECK---ESGRQFCIAVTHLKARTGWERFRSAQGCDLLQNLQNITEGAKIPL 316

  Fly   245 VLTGDFNSLPDSSPIEFLVGKNGDVDSTACPEPLHFEIIDSGEGTASTYQNEWVI---------V 300
            ::.||||:.|.....:.....:.:::|.       :::: |.:|.:......|.|         :
  Rat   317 IVCGDFNAEPTEEVYKHFASSSLNLNSA-------YKLL-SPDGQSEPPYTTWKIRTSGECRHTL 373

  Fly   301 DYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYALGAVFT 352
            |||.     .|||.|...|...|.:..: ||..::|::...|||.:|...|:
  Rat   374 DYIW-----YSRHALSVTSALDLLTEEQ-IGPNRLPSFHYPSDHLSLVCDFS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:294334 85/300 (28%)
NoctNP_612535.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..66
Deadenylase_nocturnin 141..420 CDD:197330 86/304 (28%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 216..218 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 283..286 2/2 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 321..323 1/1 (100%)
Interaction with PPARG. /evidence=ECO:0000250|UniProtKB:O35710 340..350 1/17 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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