Protein Alignment Pal2 and nhlrc3

DIOPT Version :10

• Sequence 1: NP_525118.2
• Gene: Pal2 / 37746
• FlyBaseID: FBgn0262728
• Length: 406
• Species: Drosophila melanogaster
• Sequence 2: XP_002936773.2
• Gene: nhlrc3 / 100497010
• XenbaseID: XB-GENE-988782
• Length: 344
• Species: Xenopus tropicalis
• Alignment Length: 359
• Identity: 97/359 - (27%)
• Similarity: 146/359 - (40%)
• Gaps: 82/359 - (22%)

  Fly    77 AVALQNQRSYDNVPLPAASVPTPVLVENWPTEQHSFGQVT-AVAVDPQGSPV-VFHRAERYWDVN 139
            ::.:.|:...|| ||....|       .||.....|..|| .|||||..|.| |..|.|....|.
 Frog    35 SLLIYNKEEKDN-PLYKLDV-------GWPKNADYFTGVTFGVAVDPTNSLVYVAQRGENVSKVL 91

  Fly   140 TFNESNIYYLIEYGPIKENTIYVLDAKTGAIKSGWGSNMFYMPHGL---TIDLHGNYWITDVAM- 200
            .|.|.                       |..|..|.::...||||:   :.|...:.|||||..
 Frog    92 VFTEE-----------------------GYFKQQWNTDSIDMPHGIFAVSTDKEHSIWITDVGQG 133

  Fly   201 ---HQAFKFKPFSNKPLLTIGKRFRPGSSVKHL--CKPTSIAVATTGEFFI--ADGYCNSRILKF 258
               |...|:.| |.|.|..:|...:.||::..|  .:|..|.|..:|:.:|  .||..|:|||||
 Frog   134 NFGHTVKKYSP-SGKLLQVLGTAGKSGSALDPLQFDQPAEIFVENSGDLYIVDGDGGLNNRILKF 197

  Fly   259 NAAGKLLRTI----PQPPEFLSLQVPHAITLLEHLDLLCIADRENMRVVCPKAGLISSHGE--GE 317
            .....||.|:    .:|.:|.   :||::| ::.:..:.:|||.|.|:    .....:.||  |.
 Frog   198 TKDFWLLWTLGGRGTKPGQFF---IPHSVT-VDEVGRVWVADRGNKRM----QAFDKTSGEWIGT 254

  Fly   318 PAATIQEPDLGRVFGVASFGDIVFAVNGPTSMLPVRGFTIDPRSETIIGHWGEFK---------- 372
            .::...|..   .:.|....|..:.|....::..|...::.|     ||..|:..
 Frog   255 WSSCFTEDG---PYSVRLTADKQYFVVAQLNINRVLFLSVPP-----IGSIGDCHVASAIQMADG 311

  Fly   373 -NPHSMAVSVNGSALYVTEIGTNHQTNRVWKYVL 405
             .||.:.|::|..::||.|||    ..:|.||::
 Frog   312 VKPHLVDVNINTGSMYVAEIG----AQQVQKYIM 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pal2	NP_525118.2	NHL_PAL_like	102..404	CDD:271328	90/331 (27%)
		NHL repeat	115..176	CDD:271328	18/62 (29%)
		NHL repeat	182..222	CDD:271328	16/46 (35%)
		NHL repeat	233..270	CDD:271328	16/42 (38%)
		NHL repeat	277..321	CDD:271328	11/45 (24%)
		NHL repeat	329..369	CDD:271328	7/39 (18%)
		NHL repeat	372..403	CDD:271328	10/41 (24%)
nhlrc3	XP_002936773.2	NHL	52..340	CDD:302697	91/338 (27%)
		NHL repeat	65..105	CDD:271320	18/62 (29%)
		NHL repeat	111..157	CDD:271320	16/46 (35%)
		NHL repeat	170..209	CDD:271320	16/38 (42%)
		NHL repeat	217..254	CDD:271320	11/44 (25%)
		NHL repeat	262..308	CDD:271320	8/53 (15%)
		NHL repeat	314..339	CDD:271320	10/28 (36%)