DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and hspb8

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001005658.1 Gene:hspb8 / 448147 XenbaseID:XB-GENE-945643 Length:202 Species:Xenopus tropicalis


Alignment Length:159 Identity:61/159 - (38%)
Similarity:94/159 - (59%) Gaps:20/159 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PMR----TSRLLDQHFGQGLKRDDL-----------MSSVWNS--RPTVLRSGYLRP-WHTNSLQ 64
            |.|    :|||||:.||.....|||           ::|.|:.  |..::|||...| :::....
 Frog    23 PFREQGLSSRLLDEDFGIPPFSDDLTMDWPDWARPRLTSAWSGPLRSGLVRSGMPPPVYNSRYTG 87

  Fly    65 KQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLP 129
            ..::.:|:...|:.::|.::||.|.|.|:|||..|.||.|.|.|||:|.|.|.||:.|::::|||
 Frog    88 YPDARNTVANISQPWKVCVNVQTFKPEELTVKTKDGFVEVSGNHEEQQKEGGIVSKNFTKKFQLP 152

  Fly   130 SDVNPDTVTSSLSSDGLLTIKAPMKALPP 158
            .:|:..||.:|||.:|||.|:||:  :||
 Frog   153 PEVDAQTVFASLSPEGLLIIEAPV--VPP 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 39/81 (48%)
hspb8NP_001005658.1 alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins. 86..175 CDD:469641 38/88 (43%)

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