DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and hspb8

DIOPT Version :9

Sequence 1:NP_001261156.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001005658.1 Gene:hspb8 / 448147 XenbaseID:XB-GENE-945643 Length:202 Species:Xenopus tropicalis


Alignment Length:159 Identity:61/159 - (38%)
Similarity:94/159 - (59%) Gaps:20/159 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PMR----TSRLLDQHFGQGLKRDDL-----------MSSVWNS--RPTVLRSGYLRP-WHTNSLQ 64
            |.|    :|||||:.||.....|||           ::|.|:.  |..::|||...| :::....
 Frog    23 PFREQGLSSRLLDEDFGIPPFSDDLTMDWPDWARPRLTSAWSGPLRSGLVRSGMPPPVYNSRYTG 87

  Fly    65 KQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLP 129
            ..::.:|:...|:.::|.::||.|.|.|:|||..|.||.|.|.|||:|.|.|.||:.|::::|||
 Frog    88 YPDARNTVANISQPWKVCVNVQTFKPEELTVKTKDGFVEVSGNHEEQQKEGGIVSKNFTKKFQLP 152

  Fly   130 SDVNPDTVTSSLSSDGLLTIKAPMKALPP 158
            .:|:..||.:|||.:|||.|:||:  :||
 Frog   153 PEVDAQTVFASLSPEGLLIIEAPV--VPP 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_001261156.1 metazoan_ACD 71..153 CDD:107247 39/81 (48%)
hspb8NP_001005658.1 alpha-crystallin-Hsps_p23-like 86..175 CDD:381838 38/88 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1187096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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