DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and hsp-43

DIOPT Version :9

Sequence 1:NP_001261156.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001123107.2 Gene:hsp-43 / 180895 WormBaseID:WBGene00002024 Length:393 Species:Caenorhabditis elegans


Alignment Length:207 Identity:59/207 - (28%)
Similarity:89/207 - (42%) Gaps:46/207 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FRDW---WDE-LDFPMRTSRLLDQ-----------------HFGQGLKRDDLMSSVWNSRPTVLR 51
            ||||   |.: .||..|.||.:|.                 .|...|   |.|...|.|.|..:.
 Worm    26 FRDWPLDWPKPRDFFHRFSRDVDSWWKDWPTDWPRMDAVMPRFSSQL---DRMDRNWRSDPYWMN 87

  Fly    52 SGYLRPWHTNSLQKQESGSTLNI--DSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDE 114
               |.|.....:.|:......|:  |..:|.|.:|..||.|.||.||..|..:::||:||:.:|:
 Worm    88 ---LYPRWAEPIFKEGIDVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDK 149

  Fly   115 HGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKA-PMKALPPPQTERLVQI----------- 167
            ..:....|.|:||||.||:.:::.||:.:.|.|.::| ....:.....||::.|           
 Worm   150 DNFTKMYFVRKYQLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAGHHSPRFE 214

  Fly   168 -----TQTGPSS 174
                 :|.||:|
 Worm   215 NGTLRSQRGPNS 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_001261156.1 metazoan_ACD 71..153 CDD:107247 31/84 (37%)
hsp-43NP_001123107.2 metazoan_ACD 107..186 CDD:107247 29/78 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1187096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45640
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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