DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)efl and hsp-16.11

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_505357.1 Gene:hsp-16.11 / 179289 WormBaseID:WBGene00002017 Length:145 Species:Caenorhabditis elegans


Alignment Length:88 Identity:36/88 - (40%)
Similarity:53/88 - (60%) Gaps:2/88 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSD 131
            ||...:|.| :||.:.|:|.||.|.::.:.:....:.::|:.|.| .||||..:.|||...||.|
 Worm    39 ESSEIVNND-QKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELK-TEHGYSKKSFSRVILLPED 101

  Fly   132 VNPDTVTSSLSSDGLLTIKAPMK 154
            |:...|.|:||.||.|:|:||.|
 Worm   102 VDVGAVASNLSEDGKLSIEAPKK 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 32/81 (40%)
hsp-16.11NP_505357.1 metazoan_ACD 42..123 CDD:107247 32/82 (39%)

Return to query results.
Submit another query.