DRSC/TRiP Functional Genomics Resources

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Protein Alignment St3 and ssu-1

DIOPT Version :10

Sequence 1:NP_001261155.1 Gene:St3 / 37743 FlyBaseID:FBgn0265052 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_507880.1 Gene:ssu-1 / 190959 WormBaseID:WBGene00013748 Length:412 Species:Caenorhabditis elegans


Alignment Length:304 Identity:72/304 - (23%)
Similarity:133/304 - (43%) Gaps:48/304 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PRSYPTN-LIDKD-WGNRKLFYTKDSENFLRLVHDMKLRDDDVWIVTLPKCGTTWMQELLWLLLN 70
            |..:|.. :||.: |  ..:|..|:    :|....|:..:.||.|.|.|||||||:|.:...|:.
 Worm    53 PNGHPKQVVIDGEIW--PPIFKPKN----VRTAKSMQFGETDVVIATYPKCGTTWLQHITSQLIK 111

  Fly    71 NCDFEGALAKDQELRTPFLEFGYSVFHDPNRSFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKV 135
            ..|::.....:..:::|.:|...:.|.|         ::|.||::|:|.....:|.   ....|.
 Worm   112 GHDYKAGKGNELCVQSPMIERMGAAFAD---------NIKGPRVLKTHFHHYNIPK---YPDTKY 164

  Fly   136 IYVSRNPLDSYVSRYYHGVSFG-FNYGKSLHQYFDEVLASDDFP-TEFIEHAHEFYQLRNEPWVF 198
            ||..|||.|...|.::|..:|. :|:.......|.::.||.... .::.||...:.....:..|.
 Worm   165 IYCVRNPKDCLTSYFHHNRNFKIYNWANGTWDVFLDLFASGQLAFGDYFEHLLSWLPCLKDDNVL 229

  Fly   199 YTSFEMMKKDLRGVINDVSRFL-----NKPINDQQMEKLLKHLSFAEMKKNPTTNHLW----ELA 254
            :..:|.|.:||...:..:.:||     ::..|.:.:.:::.:.:...|||:   ...|    :|.
 Worm   230 FLKYEDMFQDLENAVYKIGQFLGGEAAHRVENPEILREIVDNSTIDAMKKD---QKRWFPESQLH 291

  Fly   255 QVQHENAGKEMHPFVRRGDVNGYKDELKPEQIEKANVRIQEVLA 298
            :|:          |:|:|....:|:....||.:    ||..:.|
 Worm   292 KVE----------FIRKGGSRDWKNYFTREQSD----RIDSIFA 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
St3NP_001261155.1 Sulfotransfer_1 45..301 CDD:425820 63/265 (24%)
ssu-1NP_507880.1 Sulfotransfer_1 86..328 CDD:425820 63/265 (24%)

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