DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde5a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_012821480.2 Gene:pde5a / 780273 XenbaseID:XB-GENE-479676 Length:943 Species:Xenopus tropicalis


Alignment Length:806 Identity:176/806 - (21%)
Similarity:304/806 - (37%) Gaps:158/806 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 LVKSKEEALDTLQK---SYATAQCYHLIIIDARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKS 399
            |..|:::.|..||.   |.|..||..|:.:....|.:||    ..|:.|....|:..:||..:.|
 Frog   191 LSDSEKKELMPLQPPSLSRAGDQCSRLLELVKDISSHLD----VTTLCHKIFLHIHELIAADRYS 251

  Fly   400 FF-------EKDDVLIALLDAGVNRCVAETTNLAMCSVELKQILHSII---RPHNVMST-QQALY 453
            .|       .|..::..|.|......|.:.:|..:.....|.|:..:.   :|.|:... |.:.:
 Frog   252 LFLVCEDSSNKKFLVSRLFDVAEGTTVEQASNNCIRLEWNKGIVGHVAEFGQPLNIKDAYQDSRF 316

  Fly   454 TALHRLKEVVLI----TDDLLRIQYANRATE-----RLLNMR--LDEIISKQLEDIFVSDLSTIS 507
            .|     ||..|    |..:|.:...|...|     :.:|.:  .:...:.|.|..|.:.|:...
 Frog   317 NA-----EVDQITGYKTQSILCMPIKNHREEVVGVAQAINKKSGSNGTFTDQDEKDFAAYLAFCG 376

  Fly   508 EQCKNIKEFDGILTVRRKSQ-----------EGIPMHVRVVPVACI------GSAPTHLIFNFDV 555
            ....|.:.::..|...|::|           |...:.|.:..:|..      ....|..|.:.|.
 Frog   377 IVLHNAQLYETSLLENRRNQVLLDLATLIFEEQQSLEVILKKIAATILSFMQAQRCTIFIVDEDS 441

  Fly   556 PGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRSI----------ASDGLRRTSLAKLTSLP--- 607
            |.   .|.:......:....|..:|:| .:||..:          ..:.:....:.|.|..|   
 Frog   442 PD---TFSSVFHMESDELEESADAVKR-EYDVSKMNYMYAQYVANTMEAINIPDICKDTRFPWTN 502

  Fly   608 -------------LEAPI-----TKII---NLLSQVQENCSADEARLIDKVLEFLKRE------- 644
                         |.:||     .|:|   .|:::|.||..        |:..|.|.:       
 Frog   503 GNEEKNFKHIQSLLCSPIKNAKKNKVIGVCQLVNKVDENSG--------KIKAFNKNDEQFLEAF 559

  Fly   645 ------GLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMK 703
                  |:.:.||.|: .:..:|..::...:......::...:.:..:..|      ||||:...
 Frog   560 AIFCGLGIQNTQMFEV-VERAMAKQMVTLEILSYHASAAEEETMELQVTAG------AIVPSAQS 617

  Fly   704 SNPIIMELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNID-ENVCKAWLAVIEA 767
            ..      |.|....||      |::|....|... .||...::..|..:. |.:|: |:..::.
 Frog   618 LK------LTEFYFSDF------ELSDMETTLATS-RMFTDLNLVQTFQMKYETLCR-WILSVKK 668

  Fly   768 HYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCN 832
            :|||:..|||..||.:..|.  .|....|.|....::.:|....:||..:||:||.|.:::|:..
 Frog   669 NYRKNVAYHNWRHAFNTAQC--MFAALRTGKIQGKLNDLEILALMIATLSHDLDHRGVNNSFIQR 731

  Fly   833 SNDALAVLYNDLTVLENHHAAITFK---LTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTR 894
            |...||.||.. :::||||    |.   :.|......|...|..:.||:....|...||||::..
 Frog   732 SEHPLAQLYCH-SIMENHH----FDQCLMILNSQGNQILSGLSVQDYKTVLKMIKQAILATDLAL 791

  Fly   895 HFEHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFM 959
            :.:..:.|..:...::.:..:|...|    |...||:...|:|...:|.......|..:|.|::.
 Frog   792 YIKRRSDFFELVNKKKFKWDDPSQKE----LFLAMLMTACDLSAITKPWPVQQRIAELVASEFYD 852

  Fly   960 QTDEEKQRHL---PIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFIDMPQ----LITYMQI 1017
            |.|:|: |.|   ||.: |.......||..|:|||:.:..::   :|:...:.:    |:...|.
 Frog   853 QGDKER-RELNIEPIDL-MNREKKDKIPSMQVGFIDAVCLEL---YEALTQISESCYPLLDGCQR 912

  Fly  1018 NYSQWKKYDEQGVNTLAEIMAKQPPV 1043
            |...|:...||....|......||.|
 Frog   913 NRQMWQILAEQQEKNLVNGAKSQPEV 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 18/101 (18%)
PAS_9 463..539 CDD:290162 16/97 (16%)
PDEase_I 775..1016 CDD:278654 66/250 (26%)
pde5aXP_012821480.2 GAF 229..386 CDD:214500 32/165 (19%)
GAF 412..577 CDD:214500 31/177 (18%)
PDEase_I 676..911 CDD:395177 66/250 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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