DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde2a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_031751996.1 Gene:pde2a / 780063 XenbaseID:XB-GENE-5945995 Length:964 Species:Xenopus tropicalis


Alignment Length:1034 Identity:215/1034 - (20%)
Similarity:372/1034 - (35%) Gaps:302/1034 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GRSALQPEIVEAIRSLDVPALR-------------LNNLSFDGSTDPKGERNHAEEEP--LTPGH 237
            |..|||..::.....:|:|.||             ::| :|....|.:| |...::.|  |.|..
 Frog    52 GSEALQDALLTLGSIIDIPRLRDAIRDAIASVLPKVDN-AFIYLLDAEG-RLVCDDPPHELPPEG 114

  Fly   238 DHEDSVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAGKKNPPTEEEEFRTFQRNLMDLKYPTV 302
            ...|:|:|::::.|                       :|.  .|:|          |:..:..::
 Frog   115 KLRDAVLLQKRIEC-----------------------SGL--TPSE----------LLGQQMSSL 144

  Fly   303 LPPNPPLKALLVFHKSDS----ICEAITAACQRHQLDVTLVKSKEEALDTLQKSYATAQCYHLII 363
            ..|.||.|.:|:....|.    :...|...|.:      |..|.|:.|.||:| :....|..::.
 Frog   145 AAPLPPDKQVLILPLLDQDTARVVSVILLHCSQ------LSDSDEQNLRTLEK-HTLVACKRVLA 202

  Fly   364 ID-ARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKSFFEKDDVLIALLDAGVNRCVAETTNLAM 427
            |. .:.|..:....::   ..|:.:.|........:|:.|.|..::.|       | .|..:|..
 Frog   203 IQKLQPSPQVPPSPLS---PRTYQNSLPKPSPTANESYDELDRKILQL-------C-GELYDLDA 256

  Fly   428 CSVELKQILHSIIRPHNVMSTQQALYTALHRLKEVVLITDD---LLRIQYANRATERLLNM---- 485
            .|:::|.|       |.:....|:....|      :|:::|   |.......:..|..::.    
 Frog   257 ASLQIKVI-------HYLEQQTQSPCCCL------LLVSEDSHQLFCQVVGGKVLEEEISFPLTF 308

  Fly   486 -RLDEIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVR----VVPVACIGSA 545
             .|.:::.|: :.|.:.|:|:     :..::.:.:|.....|...:|:..|    ||.:||.   
 Frog   309 GHLGQVVDKK-KSITLQDISS-----EEHRQLNNMLGFEVHSMLCVPVISRATSQVVALACA--- 364

  Fly   546 PTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKL------- 603
                   |:..||:...:            ..|.::.|.....::.:..|......||       
 Frog   365 -------FNKQGGKYTEV------------DEHKIQHCFCYTSTVLTSTLAFQKEQKLKCECQAL 410

  Fly   604 -------------TSLPLEAPITKIINLLSQVQENCSA-----DEARLIDKVLEFLKREGLYSPQ 650
                         .|:.|:..||:..||.:  .|.||.     ....|:.||.:    .|:...:
 Frog   411 LQVAKNLFTHLDDVSVLLQEIITEARNLSN--AEICSVFLLERQSHELVAKVFD----GGVVDDE 469

  Fly   651 MKEIR--TDDPIATDL--IGALLTGPSVYSS---RRSSNDSIIRTGSSTRTAAIVPAKMKSNPII 708
            ..|||  .|..||..:  .|.:|.....||.   .|..:||   ||..||.....|.|.:||.:|
 Frog   470 SYEIRIPADQGIAGHVATTGQILNIKDAYSHPLFYRGVDDS---TGFRTRNILCFPIKNESNEVI 531

  Fly   709 --MELL-----------DESLSWDFDIFKLEEITDYHPLLY-----------LGMEM-------- 741
              .||:           ||.|:..|.|:.  .|:..|.|||           |..||        
 Frog   532 GVAELVNKINGPGFTKFDEDLATAFSIYC--GISIAHSLLYKQVREAQFRSHLANEMMMYHMKVC 594

  Fly   742 -----------------------------------------FRRFDVFATLN---IDENVCKAWL 762
                                                     ...|:....:|   ||......:.
 Frog   595 EDETKKLQSNGIVSVCQIDPGFASFSYTPRSLPEDDTVMCVISMFEDMGFVNNYKIDRTTLIRFC 659

  Fly   763 AVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRME--EATAL-IAAAAHDVDHPG 824
            .:::..|| ...|||..||..|     :....|..|::.:::.:|  |..|| ::...||:||.|
 Frog   660 LMVKKGYR-DPPYHNWMHAFSV-----SHFCYLLFKNLELVNYLEYIEIFALFVSCLCHDLDHRG 718

  Fly   825 RSSAFLCNSNDALAVLY-NDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMIL 888
            .:::|...|...||.|| ::.:|:|.||.|....: |.....||.:...::.|:.....:.|:||
 Frog   719 TNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAI-LNSQGCNILEQFSRKDYQRMLDLMRDIIL 782

  Fly   889 ATEMTRH---FEHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWA 950
            ||::..|   |:.|.: :|..|.:....|:       ..|:..:|:..:|:|:..:..:...:.|
 Frog   783 ATDLAHHLRIFKELTR-MSQDGFDPQNKHH-------HYLLICLLMTSSDLSDQTKGWKTTRKIA 839

  Fly   951 RRIAEEYFMQTDEEK-QRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWES-FIDMPQLIT 1013
            ..|.:|:|.|.|.|| ..:.|  ..|.||....||:.||.|:|:|...:.:..:. |....:|..
 Frog   840 ELIYKEFFSQGDLEKAMGNRP--SEMMDREKAYIPELQISFMEHIAMPIYNLLKDLFPRSAELYE 902

  Fly  1014 YMQINYSQWKK-----------------------------YDEQGVNTLAEIMAKQPPV 1043
            .:..|..:|.:                             :||..:|..||....:.||
 Frog   903 RVATNREKWTRVSHKFTIRGLPSNNSLDFLDEEYDIQEGLHDELRMNGCAETQGHREPV 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 15/91 (16%)
PAS_9 463..539 CDD:290162 15/87 (17%)
PDEase_I 775..1016 CDD:278654 68/249 (27%)
pde2aXP_031751996.1 GAF 255..401 CDD:214500 29/186 (16%)
GAF 423..574 CDD:214500 47/161 (29%)
PDEase_I 671..904 CDD:395177 68/248 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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