DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde10a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_038945075.1 Gene:Pde10a / 63885 RGDID:68434 Length:1075 Species:Rattus norvegicus


Alignment Length:1222 Identity:238/1222 - (19%)
Similarity:393/1222 - (32%) Gaps:457/1222 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AIAIAAISDRSGDNRNERPRPLPDDDSIRSRLIS-AAHLDLDVGLELASDSTAVPAN--GGIRPK 103
            |:.::...:..|..|.|...|.|     .||.:| |.|              |.||.  |.:...
  Rat    42 AVGLSLARELLGCGREELAAPPP-----LSRSLSPAGH--------------ASPAGGPGALSVL 87

  Fly   104 SEGACP------------EMKVETISAATS----PPPPRPLHGTSGPVAISLPFVGRNSS-KTPE 151
            |.|.|.            ...|.:.|.::|    ||||.|          ..|.|..:|: ..||
  Rat    88 SAGGCGWVAARAPWALAFSSPVPSSSFSSSWYFWPPPPLP----------PPPLVPSSSAFHLPE 142

  Fly   152 EMELEYEANVEA-----------------ESRDIMTPLRRNTRPLSVSFGGGGGRSALQPEIVEA 199
            .:.....|....                 |:..:..|...:.|....|.||.|||..|  .:..|
  Rat   143 RLPRREGAAAAGGGGGGGGGDAGGGGGGQEADPLSVPPGSSHRSGGGSSGGSGGRWRL--FLSPA 205

  Fly   200 IRSLDVPAL------------------RLNNLSFDGSTD------------------PKGER-NH 227
            |:.|.:||.                  |.::|.|.|:..                  |:|.. ..
  Rat   206 IQGLLLPARSGPRPPPPPRLPLHPGAHRADSLGFPGAGGGCPGLGPGSAAGGRTPWRPRGTALPL 270

  Fly   228 AEEEPLTPGHDHED-----SVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAG----------- 276
            |...||..|.|.||     :...||...|.  .:.||.:.::.....||..|..           
  Rat   271 ATAWPLLFGSDMEDGPSNNASCFRRLTECF--LSPSLTDEKVKAYLSLHPQVLDEFVSESVSAET 333

  Fly   277 ------KKNPPTEEEEFRTFQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAITAACQRHQLD 335
                  :||...|:|                   |:|.    .|....|:..:.:.     ::|:
  Rat   334 VEKWLKRKNNKAEDE-------------------PSPK----EVSRYQDTNMQGVV-----YELN 370

  Fly   336 VTLVKSKEEALDTLQKSYATAQCYHLIIIDARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKSF 400
            ..:    |:.|||...:       ||::                       :.|::||.:..|: 
  Rat   371 SYI----EQRLDTGGDN-------HLLL-----------------------YELSSIIRIATKA- 400

  Fly   401 FEKDDVLIALLDAGVNRCVAETTNLAMCSVELKQILHSIIRPHNVMSTQQAL------------- 452
               |...:..|    ..|     |.::|          :..|..:...|..|             
  Rat   401 ---DGFALYFL----GEC-----NNSLC----------VFTPPGMKEGQPRLIPAGPITQGTTIS 443

  Fly   453 -YTALHRLKEVVLITDDLLRIQYANRATERLLNMRLDEIISKQLEDIFVSDLSTISEQCKNIKEF 516
             |.|..|   ..|:.:|:|..:...|.|......|:..::.          |..::.    |.:.
  Rat   444 AYVAKSR---KTLLVEDILGDERFPRGTGLESGTRIQSVLC----------LPIVTA----IGDL 491

  Fly   517 DGILTV-RRKSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSV 580
            .|||.: |...:|...:..:.|..|.:..|..                            ::|.|
  Rat   492 IGILELYRHWGKEAFCLSHQEVATANLAWASV----------------------------AIHQV 528

  Fly   581 RRCSFDVRSIASDGLRRTSLAKLTSLP---LEAPITKIINLLSQVQENCSADEARLIDKVLEFL- 641
            :.|              ..|||.|.|.   |:...|...|:::             ||.:||.: 
  Rat   529 QVC--------------RGLAKQTELNDFLLDVSKTYFDNIVA-------------IDSLLEHIM 566

  Fly   642 -------------------KREGLYS---------------PQMKEIR--TDDPIATDL--IGAL 668
                               |.:.|||               .:.||||  .:..||..:  .|.:
  Rat   567 IYAKNLVNADRCALFQVDHKNKELYSDLFDIGEEKEGKPVFKKTKEIRFSIEKGIAGQVARTGEV 631

  Fly   669 LTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPI-IMELL-----------DESLSWDFD 721
            |..|..|:..|.:.:..:.||.:||....:|...:.:.| :::::           ||:....|.
  Rat   632 LNIPDAYADPRFNREVDLYTGYTTRNILCMPIVSRGSVIGVVQMVNKISGSAFSKTDENNFKMFA 696

  Fly   722 IF-----------------------KLEEITDYHP---------LLYLGM--------EMFRRFD 746
            :|                       .:|::: ||.         |::..:        |:| .||
  Rat   697 VFCALALHCANMYHRIRHSECIYRVTMEKLS-YHSICTSEEWQGLMHFNLPARICRDIELF-HFD 759

  Fly   747 VFATLNI-------------------DENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFI 792
            :....|:                   .|.:|: ::..::.:||:. .|||..||..|.....|. 
  Rat   760 IGPFENMWPGIFVYMIHRSCGTSCFELEKLCR-FIMSVKKNYRRV-PYHNWKHAVTVAHCMYAI- 821

  Fly   793 TQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFK 857
              |.|.:.|..| :|....|||...||:||.|.|:::|...:..||.||:..| :|.||.:.|..
  Rat   822 --LQNNNGLFTD-LERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYSTST-MEQHHFSQTVS 882

  Fly   858 LTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEET 922
            : |..:..|||..|....|:.....|...|:||::..:|.:..:...::.......|| |:..:.
  Rat   883 I-LQLEGHNIFSTLSSSEYEQVLEIIRKAIIATDLALYFGNRKQLEEMYQTGSLNLHN-QSHRDR 945

  Fly   923 SILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHL-PIVMPMFDR-ATCSIPK 985
            .|   .:::...|:.:..:........|..|..|::.:.||.|:..: ||  ||.|| ....:|:
  Rat   946 VI---GLMMTACDLCSVTKLWPVTKLTANDIYAEFWAEGDEMKKLGIQPI--PMMDRDKRDEVPQ 1005

  Fly   986 SQIGFIEYIIQDMMHAWESFIDMPQLITYMQI-------------NYSQWKK 1024
            .|:||.            :.:.:|...|..||             |.:||:|
  Rat  1006 GQLGFY------------NAVAIPCYTTLTQILPPTEPLLKACRDNLNQWEK 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 14/80 (18%)
PAS_9 463..539 CDD:290162 14/76 (18%)
PDEase_I 775..1016 CDD:278654 65/242 (27%)
Pde10aXP_038945075.1 GAF 382..525 CDD:396252 33/240 (14%)
GAF 558..713 CDD:214500 29/154 (19%)
PDEase_I 805..1037 CDD:395177 67/255 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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