DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and pde11al

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_697567.3 Gene:pde11al / 569112 ZFINID:ZDB-GENE-031118-106 Length:918 Species:Danio rerio


Alignment Length:919 Identity:200/919 - (21%)
Similarity:327/919 - (35%) Gaps:239/919 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 LRLNNLSFDGSTDPKGERNHAEEEPLTPGHDHEDSVVLRRKVNCLERKAHS-----------LYE 261
            ||.|   |..|......|.:.|...||.   ||....:||:  .|.|||.|           |.|
Zfish    76 LRKN---FARSKAMTAHRTYDEHVSLTA---HESQSSMRRR--ALLRKASSLPPTTAHILSALLE 132

  Fly   262 RRLPRVPKLHLLVAGKKNPPTEEEEFRTFQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAIT 326
            .|: .||:........|....|..|...|...:.|:.....: .|...|.|:      ::|..:.
Zfish   133 SRV-NVPQYASSAIDYKYRLKESNEREFFLELVKDISNELDM-TNLSYKILI------NVCIMVN 189

  Fly   327 A-ACQ-------RHQ-------LDV---TLVKSKEEALDTLQ-----------------KSYATA 356
            | .|.       .|:       .||   |.|:.....||:.:                 ::..|.
Zfish   190 ADRCSLFLVEGPSHKRTLVSKFFDVHSGTTVRPSSSTLDSNEVQVPWGKGIIGYVAEHGETVNTP 254

  Fly   357 QCYHLIIIDARSSKNLD-------AEHIARTIRHTHGHHLTTIIAVCKK----SFFEKDDVLIAL 410
            ..|.    |.|.|..:|       ...:...||::.|..:..:.|:.|.    .|.|.|:.::.:
Zfish   255 NAYE----DHRFSDEIDKLTGYKTQSILCMAIRNSDGEVIGVVQAINKNPSGTPFTEDDEKVLQM 315

  Fly   411 LDAGVNRCVAETTNLAMCSVELKQILHSIIRPHNVMSTQQALYTALHRLKEVVLITDDLLRIQ-- 473
            .             |..|.:.:...        .:.|..:..|.....|.|||   :||...|  
Zfish   316 Y-------------LPFCGISISNA--------KLFSESRKEYERSRALLEVV---NDLFEEQTD 356

  Fly   474 ---YANRATERLLNMRLDEIIS-KQLEDI------FVSDLSTISEQCKNIKEFDGILTVRRKSQE 528
               ...:..:|.|.:...|..| ..||||      |......:|..|                  
Zfish   357 LEKIVRKIMQRALTLLQCERCSVLLLEDIHSPVVKFSQTFELMSPLC------------------ 403

  Fly   529 GIPMHVRVVPVAC----IGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRS 589
            .:...:.:..|:|    |.::...|:.:..:|....|..       :.||....:.:...|.:||
Zfish   404 SVDRDISMEKVSCSDWLINNSIAELVASTGLPVNISDVC-------QDPRFDAEADQASGFHIRS 461

  Fly   590 IASDGLRRTSLAKLTSLPLEAPI----------TKIINLLSQVQENCSADEARLIDKVLEF---- 640
            :                 |..||          .:|:|.|.:...| .||: ||.:..:.|    
Zfish   462 V-----------------LCVPIWNRTHQIIGVAQILNRLDRKTFN-DADQ-RLFEAFVIFCGLG 507

  Fly   641 LKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSN 705
            :....:|: |:|:......:|.|::                  |...|.|......:..||:   
Zfish   508 INNTMMYN-QVKKTWAKQSVALDML------------------SYHATCSKAEVDRLKAAKI--- 550

  Fly   706 PIIMEL-LDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHY 769
            |:..|| :||   :.|:.|.|    |...::...:.||....|.....||..|...||..:..:|
Zfish   551 PLSSELGIDE---FHFNDFSL----DNDAMITASLRMFLELGVVQKFKIDYEVLCRWLLTVRKNY 608

  Fly   770 RKSNTYHNSTHAADVMQ------ATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSA 828
            | :..|||..||.:|.|      .|.||...||..:.|.:        ::....||:||.|.::|
Zfish   609 R-TVAYHNWRHAFNVSQCMFIMITTAAFQEVLTETETLAL--------MVGCFCHDLDHRGTNNA 664

  Fly   829 FLCNSNDALAVLYNDLTVLENHH--AAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATE 891
            |...|..|||:||.....||:||  .|:   :.|..:..|||.||..:.|.:....:...||:|:
Zfish   665 FQAKSGSALALLYGTSATLEHHHFNHAV---MILQSEGHNIFANLCSKEYCNMMQLLKQAILSTD 726

  Fly   892 MTRHFEHLAKFVS-VFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAE 955
            :|.:|:....|.. |..|:     ...:|||...:.|.||:...|:....||.:...:.|..:..
Zfish   727 LTLYFKKRTTFFDCVLSGQ-----FSWSDEEHRDMFRSMLMTACDLGAVTRPWEISKQVAELVTS 786

  Fly   956 EYFMQTDEEKQRHLPIVMPMFDR-ATCSIPKSQIGFIEYIIQDMMHAWESFIDMPQ----LITYM 1015
            |:|.|.|.|:.........:||| ....:|..|:.:|:.|.:.:   :|:.:.:.:    ::..:
Zfish   787 EFFEQGDRERSELKLTPAAIFDRNRKDELPVLQLEWIDGICKPL---YEALVKLNRKLQPMVDGI 848

  Fly  1016 QINYSQWKK 1024
            ..|..:|::
Zfish   849 DANRKKWEE 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 18/91 (20%)
PAS_9 463..539 CDD:290162 15/87 (17%)
PDEase_I 775..1016 CDD:278654 69/254 (27%)
pde11alXP_697567.3 GAF 172..334 CDD:214500 30/193 (16%)
GAF 356..518 CDD:214500 36/206 (17%)
PDEase_I 613..849 CDD:278654 69/254 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589316
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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