DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde3a

DIOPT Version :10

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_009298269.1 Gene:pde3a / 567051 ZFINID:ZDB-GENE-041210-23 Length:1124 Species:Danio rerio


Alignment Length:558 Identity:148/558 - (26%)
Similarity:233/558 - (41%) Gaps:131/558 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 LPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLLSQVQENCSADE 630
            ||.|:..|..|.|.              .|..:..|..:|..|..|.|.:.:       :|....
Zfish   496 LPDPELPPPRSPHK--------------ALTHSQSAPSSSAALWPPPTPLCS-------SCGRPY 539

  Fly   631 ARLIDKVLEFLKR--EGLYSPQMKEIRTDDPIATDLIGALLTG--PSVYSSRRSSNDSIIRTG-- 689
            ::         :|  :|...|..:..::|:|       |:::.  .|.|.:..|.:....:|.  
Zfish   540 SK---------QRHSDGSTEPAERTQQSDEP-------AMMSSDYDSTYETNHSDSSDFAQTDED 588

  Fly   690 -SSTRT---AAIVPAKMK----SNPIIMELLDESL----SWDFDIFKLEEITDYHPLLYLGMEMF 742
             .:.||   |.::||:.|    ..|::||.|:..|    :|:|.||.|.|.|:......|....:
Zfish   589 REARRTLTLATLIPAEEKPILAPEPLLMEGLEPLLCQINNWNFPIFSLVEKTNGRCGCILSQMSY 653

  Fly   743 RRF---DVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQ---------- 794
            |.|   .:|.|..|.......:...:|..|| ...|||..||.||:.|.....||          
Zfish   654 RLFVDTGLFETFKIPVREFMNYFHALENGYR-DIPYHNRIHATDVLHAVWYLTTQPVPGLPTLRT 717

  Fly   795 LTNKDM---LVMDRME------------------------EATAL-IAAAAHDVDHPGRSSAFLC 831
            |.:.|.   |...||:                        |..|| :|||.||.|||||::|||.
Zfish   718 LGSSDSDSGLAHGRMKYLMSRTNAVEEEGYGCLSGLIPALELMALYVAAAMHDYDHPGRTNAFLV 782

  Fly   832 NSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHF 896
            .::...||||||.:||||||||..:.|.:...:.|...:||...:|..|..:|:.||||::.:||
Zfish   783 ATSAPQAVLYNDRSVLENHHAASAWNLFMSRPEYNFLASLDHMEFKRFRFLVIEAILATDLKKHF 847

  Fly   897 EHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQT 961
            :.||:| :...|::.......|:|...:|:.:|.||:||::.|.:.....::|...|..|::.|.
Zfish   848 DFLAEF-NAKVGDDGCSGIDWTNENDRLLVCQMCIKLADINGPLKCKDLHLQWTEGIVNEFYEQG 911

  Fly   962 DEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFIDMPQLITYMQINYSQW---- 1022
            |||....||| .|..||:...:.|.|..||.:|:..:..:::|...||          .:|    
Zfish   912 DEESSLGLPI-SPFMDRSAPQLAKLQESFITHIVGPLCSSYDSAALMP----------GRWVHPL 965

  Fly  1023 ------------------KKYDEQGVNTLAEIMAKQPP 1042
                              .:.:|:..:|.:|:..|..|
Zfish   966 PKDGDEVEDESEEEDEDTAEEEEEDASTSSELSQKPAP 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 NtrB 446..>539 CDD:443061
PDEase_I 775..1016 CDD:459723 92/278 (33%)
pde3aXP_009298269.1 PDEase_I 688..947 CDD:459723 89/260 (34%)
Blue background indicates that the domain is not in the aligned region.

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