DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and pde9ac

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_692819.3 Gene:pde9ac / 564389 ZFINID:ZDB-GENE-130530-807 Length:558 Species:Danio rerio


Alignment Length:511 Identity:146/511 - (28%)
Similarity:234/511 - (45%) Gaps:103/511 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   581 RRCS-FDVRSI--ASDGLRRTSLAKLT-----------SLPLEAP--ITKII------------- 616
            |.|| .|::.:  :|..:.|.:...:|           ::|...|  :.|||             
Zfish    67 RHCSPCDIKELLCSSSNIPRNTAIMMTDPEGAIVSIDPTMPTNNPNFLYKIIPLSASQLGEKEDM 131

  Fly   617 --NLLSQVQENCS------------ADEARLIDKVLEFLKREGLYSPQMKEIRTD-----DPIAT 662
              |:||||.|..|            .:...:::|.:|.   |||...::::.:.|     |.: |
Zfish   132 FQNVLSQVAEQFSRAFRINELKTEVTNRLAMLEKRVEL---EGLKVVEIEKCKNDMRKLRDEM-T 192

  Fly   663 DLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLE- 726
            ...||.:..|..|:   .|:|     |........:|:..|.. :..|.::......||::..| 
Zfish   193 SRAGARVNCPCKYN---FSDD-----GKKLTPRRDIPSYPKYT-LSQETIEALKKPTFDVWHWEH 248

  Fly   727 -EITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGA 790
             |:......:|..:.:.:.|      ||:....|.||..|:.:|| ||.:||..|...|.|....
Zfish   249 NEMLSCLEYMYHDLGLVKEF------NINPITLKRWLLGIQENYR-SNPFHNFRHCFCVSQMMYG 306

  Fly   791 FI------TQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLEN 849
            .|      .:||..|:.::        :.||..||:||||.::.:..|:...|||.|||::.|||
Zfish   307 MIHLCNLQEKLTLTDLGIL--------MTAAVCHDLDHPGYNNTYQINARTELAVRYNDISPLEN 363

  Fly   850 HHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDH 914
            ||.|:.|:: |...:.|||.|::.|.:|..|..||.:||||:|.||.|.|..|      :...||
Zfish   364 HHCAVAFQI-LSLPECNIFANVEPEAFKQIRQAIITLILATDMARHGEILDSF------KHKVDH 421

  Fly   915 NPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRA 979
            ...|:||....::.:|||..|:||..||.:....|...:.||||||:|.||...||:...| ||.
Zfish   422 FDFTNEEHVACLKMVLIKCCDISNEVRPTEVAEPWVDCLLEEYFMQSDREKSEGLPVAAFM-DRE 485

  Fly   980 TCSIPKSQIGFIEYIIQDMMHAWESFIDM-PQLITYM-------QINYSQWKKYDE 1027
            ..:.|.:|||||::::..|   :|:.:.: ||:...|       :.:|.:.|:.|:
Zfish   486 KVTKPTAQIGFIKFVLIPM---FETVMKLFPQIEEIMVQPLRDSRDHYEELKQIDD 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 90/254 (35%)
pde9acXP_692819.3 PDEase_I 291..521 CDD:278654 90/248 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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