DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde3b

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_691883.4 Gene:pde3b / 563432 ZFINID:ZDB-GENE-160728-20 Length:1103 Species:Danio rerio


Alignment Length:617 Identity:157/617 - (25%)
Similarity:252/617 - (40%) Gaps:143/617 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 SDLSTISEQCKNIKEFDGILTVRRKSQEGIPM---HV---------RVVPVACIGSAPTHLIFNF 553
            |:||:......|    ..:||:.::....:.:   |.         .:.||    ::|:|     
Zfish   442 SELSSFVSNGPN----SNLLTIPKQRSSSVTLSYGHTLSRRPGASPSLSPV----TSPSH----- 493

  Fly   554 DVPGGQMDFIATLPQPKEAP-------RGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPL--- 608
            ..|.|....:.| ..|.|.|       :.|::..:...:.:.|.......|||    .|.||   
Zfish   494 SPPAGPGSSLVT-RSPVEFPDTADFLTKPSVNLHKPLGYTMSSPDFQQQYRTS----ASTPLCTS 553

  Fly   609 -------EAPITKII----NLLSQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIAT 662
                   ..|..:::    ...:::|...|||.|....   |.|.||.....:.:|.||.|    
Zfish   554 CGRQMLKGVPSVEVVEGHHTTANEMQRTRSADGAEYGG---ENLIREESLEAESQEERTSD---- 611

  Fly   663 DLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVP---AKMKSNPIIM---ELLDESLSWDFD 721
                  ..|..|.|.......:     |||..:::.|   .:.:.:.:::   ||:::..:|:|.
Zfish   612 ------TAGEKVNSQPEEEEQT-----SSTEQSSLDPEGDEEFRLDLMLVEHEELMEKINTWNFQ 665

  Fly   722 IFKLEEITDYHP---LLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAAD 783
            ||:|.::|....   |.|:...:|:...:|....|.......:...:|..|| ...|||..||.|
Zfish   666 IFELMDLTGGKTGRILSYVAYTLFQDTGLFEIFKIPVREFMTYFCALENGYR-DIPYHNRVHATD 729

  Fly   784 VMQATGAFITQ-------------------------------LTNKDMLVMD-----------RM 806
            |:.|.....||                               .|:|.....|           .:
Zfish   730 VLHAVWYLTTQPIPGFQQIHNEHVTGSDTDSDSGISPGRVAYATSKSSSFQDDSYGCLAWNVPAL 794

  Fly   807 EEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNL 871
            |.....:|||.||.|||||::|||..:|...||||||.:||||||||..:.|.|...:.|...||
Zfish   795 ELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWSLFLSRPEFNFLCNL 859

  Fly   872 DKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQ----TDEETSILMRRMLIK 932
            |...:|..|..:|:.||||::.:||:.||:|.|     :..|.|..    |:|...:|:.::.||
Zfish   860 DHVEFKRFRFLVIEAILATDLKKHFDFLAEFNS-----KVNDVNSPGIDWTNENDRLLVCQVCIK 919

  Fly   933 VADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQD 997
            :||::.||:.....::|...|..|::.|.|||....||| .|..||:...:.|.|..||.:|:..
Zfish   920 LADINGPAKDRSLHLKWTEGIVNEFYEQGDEEGTLGLPI-SPFMDRSAPQLAKLQESFITHIVGP 983

  Fly   998 MMHAWESFIDMPQLITYMQINYSQWKKYDEQG 1029
            :.:::::...:|          ..|  .||:|
Zfish   984 LCNSYDAAGLLP----------GYW--IDEEG 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 7/49 (14%)
PAS_9 463..539 CDD:290162 7/49 (14%)
PDEase_I 775..1016 CDD:278654 91/286 (32%)
pde3bXP_691883.4 PDEase_I 721..995 CDD:278654 90/279 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589321
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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