DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and si:dkey-219c10.4

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_017213373.2 Gene:si:dkey-219c10.4 / 562357 ZFINID:ZDB-GENE-081105-151 Length:529 Species:Danio rerio


Alignment Length:498 Identity:141/498 - (28%)
Similarity:214/498 - (42%) Gaps:130/498 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 PLEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREG---LYSPQMKEIRTDDP--------I 660
            |::.|...:.:|.....|....|       :|:....:|   ..|||   :.::.|        :
Zfish    20 PIDCPAQDVKDLFRAAAEAGPHD-------ILKLYNTKGNIINISPQ---LASNSPHSYYKLEVV 74

  Fly   661 ATD----LIG---ALLTGPSVYS--SRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELLD--E 714
            |.|    |:|   |:..|..:.|  .|..|.:..|.| .:..|.|||....:......|.|:  |
Zfish    75 AADCNSELLGSELAVALGFDLTSMEKRLQSLEKRILT-EAAETPAIVYEMKRQVESFREKLESVE 138

  Fly   715 SLSWDFDIFK----------------------------------------LEEITDY-------- 731
            .||| ..:||                                        .||:..|        
Zfish   139 HLSW-LGLFKDMSEGTHKPSPFYHKRTLRKTREECEHVREKFLQMSSLEVSEEVRQYLKTPTFDN 202

  Fly   732 -----HPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNT--YHNSTHAADVMQATG 789
                 ..::.|...|:...|..:|.||:.:|.:.:|..:   ||:.|.  :||..|...|.|...
Zfish   203 WQWEDAEIMVLLQVMYTDLDFISTFNIEPDVLQQFLYEV---YRRYNNIPFHNFKHCFCVTQMMY 264

  Fly   790 AFI--TQLTNK----DMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLE 848
            ..|  |.|.:|    |:|:|        |.:|..||:||.|.::|:..|:...||:.|||::.||
Zfish   265 GLIWLTDLRSKIDSIDLLIM--------LTSAVCHDLDHTGYNNAYQINARTELALRYNDISPLE 321

  Fly   849 NHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSV-----FGG 908
            |||.|:.|:: |...:.|||:||..|.||..|..||..||||:|:||.:.|.||.::     ||.
Zfish   322 NHHCAVAFEI-LEKTESNIFRNLPTEQYKRIREGIIKCILATDMSRHTDILNKFKAILPVFDFGN 385

  Fly   909 EEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVM 973
            ::.||          :|| .::|||:|:||.||||.....|...:.:|:|.|:|.||...|| |.
Zfish   386 KDHRD----------VLM-MIMIKVSDISNEARPMDVAEPWLDCLLQEFFNQSDMEKLEGLP-VT 438

  Fly   974 PMFDRATCSIPKSQIGFIEYIIQDMMHAWESFIDMPQLITYMQ 1016
            |..||...:.|.||.|||.:::      :..||::..|...::
Zfish   439 PFMDRDKVTKPSSQTGFIRFVL------FPLFIELANLFPCLE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 93/251 (37%)
si:dkey-219c10.4XP_017213373.2 PDEase_I 250..478 CDD:306695 93/253 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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