DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and PDE4D

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001098101.1 Gene:PDE4D / 5144 HGNCID:8783 Length:809 Species:Homo sapiens


Alignment Length:585 Identity:164/585 - (28%)
Similarity:253/585 - (43%) Gaps:145/585 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   553 FDVPGGQMDFIATLPQPKEAPRGSL-------HSVRRCSFDVR----------------SIASD- 593
            |||..|.....:.| .|..:|...|       ||.||.||..|                ||||| 
Human   153 FDVDNGTSAGRSPL-DPMTSPGSGLILQANFVHSQRRESFLYRSDSDYDLSPKSMSRNSSIASDI 216

  Fly   594 ---------------GLR--RTSLAKLTSLPLEAP----------------ITK----------- 614
                           .||  |.:.|.||:|...||                ||:           
Human   217 HGDDLIVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITEEAYQKLASETL 281

  Fly   615 -----IINLLSQVQENCSADE------ARLIDKVLEFL---KREG-------------------L 646
                 .::.|..:|...|..|      .|::::.|..|   .|.|                   :
Human   282 EELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEFISNTFLDKQHEVEI 346

  Fly   647 YSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMEL 711
            .||..||........:.:.|.    ..:..|...:|.||.|.|          .|.:...::.:.
Human   347 PSPTQKEKEKKKRPMSQISGV----KKLMHSSSLTNSSIPRFG----------VKTEQEDVLAKE 397

  Fly   712 LDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYH 776
            |::...|...:|::.|::...||..:...:|:..|:..|..|..:....:|..:|.||.....||
Human   398 LEDVNKWGLHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYH 462

  Fly   777 NSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLY 841
            |:.|||||:|:|...::  |.....|...:|...|:.|:|.|||||||.|:.||.|:|..||::|
Human   463 NNIHAADVVQSTHVLLS--TPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMY 525

  Fly   842 NDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVF 906
            ||.:||||||.|:.||| |.::..:||:||.|:..:|.|..:||::|||:|::|...||...::.
Human   526 NDSSVLENHHLAVGFKL-LQEENCDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMV 589

  Fly   907 GGEEPRDHNPQTDEETS------------ILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFM 959
                      :|.:.||            |.:.:.::..||:|||.:|:|...:|..||.||:|.
Human   590 ----------ETKKVTSSGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFR 644

  Fly   960 QTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFI--DMPQLITYMQINYSQW 1022
            |.|.|::|.:.| .||.|:...|:.|||:|||:||:..:...|...:  |...::..::.| .:|
Human   645 QGDRERERGMEI-SPMCDKHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEDN-REW 707

  Fly  1023  1022
            Human   708  707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 96/254 (38%)
PDE4DNP_001098101.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..364 4/20 (20%)
PDEase_I 461..702 CDD:278654 96/254 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 739..809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154173
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.850

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