DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and PDE4A

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001104777.1 Gene:PDE4A / 5141 HGNCID:8780 Length:886 Species:Homo sapiens


Alignment Length:558 Identity:157/558 - (28%)
Similarity:252/558 - (45%) Gaps:91/558 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 EDIFVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQM 560
            ||:.|:..:.:....::::....:||              .|||.....:|.         ||..
Human   174 EDLIVTPFAQVLASLRSVRSNFSLLT--------------NVPVPSNKRSPL---------GGPT 215

  Fly   561 DFI-ATLPQP--KEAPRGSLHSVRRC---------SFDVRSIASDGLRRTSLAKLTSLPLEAPIT 613
            ... |||.:.  ::..|.:|..:..|         ...|..:||...:|....:||.|      :
Human   216 PVCKATLSEETCQQLARETLEELDWCLEQLETMQTYRSVSEMASHKFKRMLNRELTHL------S 274

  Fly   614 KIINLLSQVQENCSADEARLIDKVLE-------FLKREGLYSPQMKEIRTDDPIATDLIG-ALLT 670
            ::....:||.|..|   ...:||..|       ..:||...:|:.:..:...|....|.. :.:|
Human   275 EMSRSGNQVSEYIS---TTFLDKQNEVEIPSPTMKEREKQQAPRPRPSQPPPPPVPHLQPMSQIT 336

  Fly   671 G-PSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLEEITDYHPL 734
            | ..:..|...:|.:|.|.|          .|.....::.:.|:....|..:||.:.:......|
Human   337 GLKKLMHSNSLNNSNIPRFG----------VKTDQEELLAQELENLNKWGLNIFCVSDYAGGRSL 391

  Fly   735 LYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKD 799
            ..:...:|:..|:.....|..:....::..:|.||.....||||.|||||:|:|...:.  |...
Human   392 TCIMYMIFQERDLLKKFRIPVDTMVTYMLTLEDHYHADVAYHNSLHAADVLQSTHVLLA--TPAL 454

  Fly   800 MLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDK 864
            ..|...:|...||.|||.|||||||.|:.||.|:|..||::|||.:||||||.|:.||| |.:|.
Human   455 DAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKL-LQEDN 518

  Fly   865 INIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEETS------ 923
            .:||:||.|...:|.|..:|||:|||:|::|...||...::.          :|.:.||      
Human   519 CDIFQNLSKRQRQSLRKMVIDMVLATDMSKHMTLLADLKTMV----------ETKKVTSSGVLLL 573

  Fly   924 ------ILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCS 982
                  |.:.|.::..||:|||.:|::...:|..||..|:|.|.|.|::|.:.| .||.|:.|.|
Human   574 DNYSDRIQVLRNMVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEI-SPMCDKHTAS 637

  Fly   983 IPKSQIGFIEYIIQDMMHAWESFI--DMPQLITYMQIN 1018
            :.|||:|||:||:..:...|...:  |..:::..::.|
Human   638 VEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 6/42 (14%)
PAS_9 463..539 CDD:290162 6/42 (14%)
PDEase_I 775..1016 CDD:278654 101/254 (40%)
PDE4ANP_001104777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..128
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..331 7/36 (19%)
PDEase_I 432..673 CDD:278654 101/254 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 682..705
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 866..886
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154172
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.850

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