DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and PDE1A

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_016859783.1 Gene:PDE1A / 5136 HGNCID:8774 Length:586 Species:Homo sapiens


Alignment Length:410 Identity:113/410 - (27%)
Similarity:195/410 - (47%) Gaps:46/410 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 LEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDD--PIATDLIGALLT 670
            ||.....:::|...::...|..||..||:....|..|    .::.:|:||.  ....|.:.:..|
Human    42 LERGDVNVVDLKKNIEYAASVLEAVYIDETRRLLDTE----DELSDIQTDSVPSEVRDWLASTFT 102

  Fly   671 GPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSN-----------PIIMELLDESLSWDFDIFK 724
            .....:.::.......|:......|.|...:|...           .:|:.|.|.. .|.||:|.
Human   103 RKMGMTKKKPEEKPKFRSIVHAVQAGIFVERMYRKTYHMVGLAYPAAVIVTLKDVD-KWSFDVFA 166

  Fly   725 LEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRK-SNTYHNSTHAADVMQA- 787
            |.|.:..|.|.::..|:|.|:|:.....|..:....:...:|..|.| .|.|||..|||||.|. 
Human   167 LNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLITFAEALEVGYSKYKNPYHNLIHAADVTQTV 231

  Fly   788 ------TGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTV 846
                  || .:..||..::|.|        :.|||.||.:|.|.::.|...:...:|:||||.:|
Human   232 HYIMLHTG-IMHWLTELEILAM--------VFAAAIHDYEHTGTTNNFHIQTRSDVAILYNDRSV 287

  Fly   847 LENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEP 911
            |||||.:..::| :.::::||..||.|:.::..|:.:|:|:|:|:|:.||:.:...         
Human   288 LENHHVSAAYRL-MQEEEMNILINLSKDDWRDLRNLVIEMVLSTDMSGHFQQIKNI--------- 342

  Fly   912 RDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMF 976
            |:...|.:.........:::..||:|:||:..:....|...:.||:|:|.|:|.:..||. .|:.
Human   343 RNSLQQPEGIDRAKTMSLILHAADISHPAKSWKLHYRWTMALMEEFFLQGDKEAELGLPF-SPLC 406

  Fly   977 DRATCSIPKSQIGFIEYIIQ 996
            ||.:..:.:||||||::|::
Human   407 DRKSTMVAQSQIGFIDFIVE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 74/229 (32%)
PDE1AXP_016859783.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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