DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and mapk14

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001005824.1 Gene:mapk14 / 448296 XenbaseID:XB-GENE-1018617 Length:361 Species:Xenopus tropicalis


Alignment Length:492 Identity:92/492 - (18%)
Similarity:162/492 - (32%) Gaps:197/492 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 GSLHSVRRCS-FDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVL 638
            |:..||  || ||.|:..     |.::.||:     .|...||:.....:|.          ::|
 Frog    34 GAYGSV--CSAFDTRTEL-----RVAVKKLS-----RPFQSIIHAKRTYREL----------RLL 76

  Fly   639 EFLKREG------LYSPQMK-EIRTDDPIATDLIGALLTGPSVYSSRRSSND-------SIIRTG 689
            :.:|.|.      :::|... |...|..:.|.|:||.|.  ::...::.::|       .|:|..
 Frog    77 KHMKHENVIGLLDVFTPAKSFEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQFLIYQILRGL 139

  Fly   690 SSTRTAAIVPAKMK-SNPII-----MELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVF 748
            ....:|.|:...:| ||..:     :::||..|:...|    ||:|.     |:....:|..::.
 Frog   140 KYIHSAGIIHRDLKPSNLAVNEDCELKILDFGLARHTD----EEMTG-----YVATRWYRAPEIM 195

  Fly   749 ATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALI 813
              ||        |:     ||.::         .|:..........||.:.:.            
 Frog   196 --LN--------WM-----HYNQT---------VDIWSVGCIMAELLTGRTLF------------ 224

  Fly   814 AAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKS 878
                     ||....      |.|.::..                .:|..:..:.:.:..|   :
 Frog   225 ---------PGTDHI------DQLKLILR----------------LVGTPEPELLQKISSE---A 255

  Fly   879 ARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPM 943
            ||:.|..:....:|        .|..||.|.     |||..:    |:.:||:...|..      
 Frog   256 ARNYIQSLPYMPKM--------NFEDVFLGA-----NPQAVD----LLEKMLVLDTDKR------ 297

  Fly   944 QFCIEWARRIAEEYFMQ---TDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESF 1005
               |..|..:|..||.|   .|:|     ||..| :|:                      ::|| 
 Frog   298 ---ITAAEALAHPYFAQYHDPDDE-----PIAEP-YDQ----------------------SFES- 330

  Fly  1006 IDMPQLITYMQINYSQWKKYDEQGVNTLAEIMAKQPP 1042
                     .:::..:||:.      |..|::...||
 Frog   331 ---------RELDIEEWKRL------TYEEVICFVPP 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 38/243 (16%)
mapk14NP_001005824.1 STKc_p38alpha 7..351 CDD:143382 90/489 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165172331
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.