DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde11

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster


Alignment Length:1150 Identity:227/1150 - (19%)
Similarity:383/1150 - (33%) Gaps:333/1150 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SSAKSSSSSAGRENPSSEPDSD-----TEPYAI---------AIAAISDRSGDNRNERPRPLPDD 66
            ||:..||||.|....|:.|...     .:||..         |.:....|..|..:.|.....|:
  Fly   141 SSSNGSSSSGGGVQTSATPQQQQQYQVQQPYQYQYQHHYHHQANSPQHHRPYDPEHARMEAWLDE 205

  Fly    67 D---------------SIRSRLISAAHLDLDVGLELASDSTAVPANGGIRPKSEGACPEMKVETI 116
            :               ::.:.|:|.|   ...|.::.|.::...|||.......|:.....|..|
  Fly   206 NQEFVQDYFIRKATRQTVDAWLVSHA---TSAGNDVVSSTSPTHANGQTSSSRGGSGATTPVRKI 267

  Fly   117 SA-----------------------ATSPPPPRPLHGTSGPVAISLPFVG--------------- 143
            ||                       :..||..   :|:.|....:|..||               
  Fly   268 SAHEFERGGLLKPIVNTIDGTPTFLSIGPPMD---NGSVGGSCSNLQNVGGVVAGQYQYNHQQHH 329

  Fly   144 RNSSKTPEEMELEYEANVEAESRDIMTPLRRNTRPLSVSFGGGGGRSALQPEIVEAIRSLDVPAL 208
            .|.:.........|:|.....|.               |.|..||.|.          :...|:|
  Fly   330 HNHAHLHHSQHSHYQAGGAVGSS---------------SLGSTGGASG----------AGGAPSL 369

  Fly   209 RLNNLSFDGSTDPKGERNHAEEEPLTPGH------DHEDSVVLRRKVNCLERKAHSLYERRLPRV 267
            ..:..:.:|...|   ..|..:.|.....      |.::.:....|..|.|.:..:|..:.|..|
  Fly   370 GGSGGAGNGHQYP---YYHCHQRPQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNV 431

  Fly   268 PKL-------HLLVAGKKNPPTEEEEFRTFQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAI 325
            ..|       ..||.|:.|.|                         ..||..||....|      
  Fly   432 SILLNADRGSLFLVQGRCNGP-------------------------DGLKKCLVSKLFD------ 465

  Fly   326 TAACQRHQLDVTLVKSKEEALDTLQKSYATAQCYHLI-------IIDARSSKNLDAEHIART--- 380
              .|.|..::      :.|..|.::.::.|....|:.       |.||...:..:.|..:.|   
  Fly   466 --VCPRSTVE------EMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGYR 522

  Fly   381 --------IRHTHGHHLTTIIAVCK-------KSFFEKDDVLIA--LLDAGVNRCVAETTNLAMC 428
                    |:.:.|    .:|.|.:       :.|.|.|:.:.:  |...|:....|:....:..
  Fly   523 TKALLCMPIKDSSG----DVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQL 583

  Fly   429 SVELKQILHSIIRPHNVMSTQQALYTALHRLKEVVLITDDLLRIQYANRATERLLNMRLDEIISK 493
            .::..|:|..:.|   ::..:|:  |..|.:..::.....|::.|    ..:.||....|:....
  Fly   584 EIKRNQVLLDLAR---MIFEEQS--TIEHMVFRILTHMQSLIQCQ----RVQILLVHEADKGSFS 639

  Fly   494 QLEDIFVSDLSTISEQCKNIKEFDGILTVRRKSQEG-IPMHVRVV-PVACIGSAPTHLIFNFDVP 556
            ::.|...:|||  .|:.          |.|....|. .|:::.:. .||..|.       ..:||
  Fly   640 RVFDFEANDLS--EEEA----------TSRTSPYESRFPINIGITGHVATTGE-------TVNVP 685

  Fly   557 GGQMD--FIATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLL 619
            ....|  |.|::.:            ..| |..|||....: :.||.:         |..:|.|:
  Fly   686 NAYEDDRFDASVDE------------NSC-FKHRSILCMAI-KNSLGQ---------IIGVIQLI 727

  Fly   620 SQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDS 684
            ::..|             |:|.|.:..:....               |:..|..::::.....  
  Fly   728 NKFNE-------------LDFTKNDENFVEAF---------------AIFCGMGIHNTHMYEK-- 762

  Fly   685 IIRTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFD--------------IFKLEE--ITDYH- 732
                       |||  .|....:.:|:|....|...|              .|:|.:  ..|.| 
  Fly   763 -----------AIV--AMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHF 814

  Fly   733 ---PLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQ 794
               ..|...:.||...|.....:||..|...||..::.:|| :.||||..||.:|.|...|.:| 
  Fly   815 EDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILT- 877

  Fly   795 LTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFK-- 857
             |.:...:...:|....:|....||:||.|.:::|...::..||.||:..| :|:||    |.  
  Fly   878 -TTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYSTST-MEHHH----FDQC 936

  Fly   858 -LTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFV-------SVFGGEEPRDH 914
             :.|......|..||..:.|......:.|.||:|::..:|:....|:       |.:..||||  
  Fly   937 LMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEPR-- 999

  Fly   915 NPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQR-HLPIVMPMFDR 978
                     .|:|.|.:.|.|:|...:|.:.....|..::.|:|.|.|.|||. ::..:..|...
  Fly  1000 ---------ALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNRE 1055

  Fly   979 ATCSIPKSQIGFIEYIIQDMMHAWESFID-MPQLITYMQINYSQW 1022
            ....:|..|:.||:.|...:..|:.:..| :..|:..::.|...|
  Fly  1056 KEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHW 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 14/81 (17%)
PAS_9 463..539 CDD:290162 14/77 (18%)
PDEase_I 775..1016 CDD:278654 67/252 (27%)
Pde11NP_001286044.1 GAF 420..582 CDD:214500 35/204 (17%)
GAF 611..762 CDD:214500 38/224 (17%)
PDEase_I 859..1094 CDD:278654 67/252 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459131
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.950

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