DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde9

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster


Alignment Length:1181 Identity:251/1181 - (21%)
Similarity:424/1181 - (35%) Gaps:376/1181 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SSAKSSSSSAGRENPSSEPDSDTEPYAIAIAAISDRSGDNRNERPRPLPDDDSIRS-RLISAAHL 79
            ||::..||||.....::...::|   |.|.||.:..|.           |::::.: .:|:....
  Fly    10 SSSRRGSSSAAAATSTAATAAET---AAAAAATTTSSS-----------DEETLETLTIITTTIT 60

  Fly    80 DLDVGLELASDSTAVPANGGIRPKSEGACPEMKVETISAATSPPPPRPLHGTSGPVAISLPFVGR 144
            |.|:  ...:.:|.|.|:|              ..|.:||.:         |:..:| :|..:..
  Fly    61 DSDI--HATTTTTTVIASG--------------TATTAAAAA---------TTATLA-TLATLAS 99

  Fly   145 NSSKTPEEMELEYEANVEAESR--------DIMTPLRRNTRPLSVSFGGGGG----RSA------ 191
            ||       ::|..:.||:|..        |..|..:..|.|...|...|..    ||:      
  Fly   100 NS-------DIEDSSPVESEDSEECEYIEIDCQTTAQEGTSPSGGSSSSGNAVLLQRSSNNLQQQ 157

  Fly   192 ----------LQPEIVEA----IRSLDVPALRLNNLS-FDGS---TDP---KGERNHAEEEPL-- 233
                      ||.::.:|    :|.:...|.|:..|| :.|.   .:|   :.:|...:|..|  
  Fly   158 QQQQQQQQQHLQLQLQQADERLLRKIGYIASRVRCLSKYYGDFRLVNPYSARRQRRQLQEILLRH 222

  Fly   234 ---TPGHDHEDSVVLR----------RKVNC------LERKAHSLYERRLPRVPKLHLLVAGKKN 279
               .||.:|:.::||.          ..::|      :..:|.|...|........|     :::
  Fly   223 SIFDPGKEHQRAIVLAAATAAIAGPLAAIDCVCGSSSISLEAVSSRSRSSELEDDHH-----EQD 282

  Fly   280 PPTEEEEFRTFQRNLMD----LKYPTVLP--------PNPPLKALLVFHKSDSICEAITAACQRH 332
            ...||:|....|.:..|    .::|:..|        |.|.:          ::....||..:|.
  Fly   283 QVQEEQEQEQHQGDTEDNEEEQEHPSEKPERTDIEEEPPPAI----------AVTTTTTATVRRK 337

  Fly   333 QLDVTLVKSKEEALDTLQKSYATAQCYHLIIIDARSSKNL------------DAEHIARTIRHTH 385
            ....:.:........::..|.:.:|.:        .|.|:            :.:|.:......|
  Fly   338 SSSSSTISGTATVSGSVSVSASASQSF--------CSNNINLLEELLIQFYEEQDHRSNLTVIRH 394

  Fly   386 GHHLTTIIAVCKKSFFEKDDVLIALLDAGVNRC----------------------------VAET 422
            .||        ::....:....|...:...|.|                            .:.|
  Fly   395 HHH--------QQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGT 451

  Fly   423 TNLAM-------------------CS---VELKQILHSIIRPHNVMSTQQALYTALHR-----LK 460
            ||:.:                   ||   ..|:..||.|...:|  :..:|:  ..||     ..
  Fly   452 TNIHLQPTSLPDGSDNPRRRRASDCSAVQAALQNQLHCITLKNN--NCGKAM--PFHRGSCGAAG 512

  Fly   461 EVVLITDDLLRIQYANRATERLLNMRLDEIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVRRK 525
            |.:|..:.:     |||||          ||              :|:.|.|:   ||..|    
  Fly   513 EHLLAANSI-----ANRAT----------II--------------LSKSCSNV---DGDAT---- 541

  Fly   526 SQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRSI 590
                             .:|.|.|   ....||.:..|.          ||: .:|..:.|:.:.
  Fly   542 -----------------ATAATAL---SSTVGGGIGGIG----------GSI-KMRASATDIETN 575

  Fly   591 ASDGLRRTSLAKL--------TSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREGLY 647
            |.:|.|...:|..        .:...|..|.::.|.:.|...|  .|:.|.:   ::.|||:..|
  Fly   576 ALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFN--DDDFRAL---VKDLKRKVEY 635

  Fly   648 SPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELL 712
            :.:|..:            .|...|.....|:||                :|...:.....:|:.
  Fly   636 TERMNWL------------CLSKRPLGPPHRKSS----------------LPKHQEVKRRFLEIC 672

  Fly   713 DESLSWD---------FDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAH 768
            |.:.|.:         ||.::..:.    .:::|...||.........:|..:..:.||..:..|
  Fly   673 DTTFSEEVRAALRLPAFDSYEWSDA----DVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKH 733

  Fly   769 YRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALI---AAAAHDVDHPGRSSAFL 830
            |.:. .:||..|...|.|...| ||:..|    ::.|:.:...||   :...||:||||.::.:.
  Fly   734 YNEV-PFHNFRHCFCVAQMMYA-ITRQAN----LLSRLGDLECLILLVSCICHDLDHPGYNNIYQ 792

  Fly   831 CNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRH 895
            .|:...||:.|||::.|||||.:|.|:| |...:.|||||..::|:.:.|..||..||||:|.||
  Fly   793 INARTELALRYNDISPLENHHCSIAFRL-LEHPECNIFKNFSRDTFNNIREGIIRCILATDMARH 856

  Fly   896 FEHLAKFVSVFGGEEPRDHNPQTDEETSI---LMRRMLIKVADVSNPARPMQFCIEWARRIAEEY 957
            .|.|.:|:.:         .|..|.....   |:..:||||||:||.||||.....|..|:.:|:
  Fly   857 NEILTQFMEI---------TPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEF 912

  Fly   958 FMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFI-DMPQLIT-------- 1013
            |.|:..||...|| |.|..|....|.|.||:.||..::..:..|....: ::.:||.        
  Fly   913 FAQSAAEKSEGLP-VTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALE 976

  Fly  1014 -YMQINYSQWK 1023
             |.::|.:|.|
  Fly   977 YYRRLNDAQTK 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 15/79 (19%)
PAS_9 463..539 CDD:290162 14/75 (19%)
PDEase_I 775..1016 CDD:278654 89/256 (35%)
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 86/243 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459135
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
76.980

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