DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and dnc

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster


Alignment Length:1148 Identity:252/1148 - (21%)
Similarity:418/1148 - (36%) Gaps:313/1148 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 VPANGGIRPKSEGACPEMKVETISAATSPPPPRPLHGTSGPVAISLPFVGRNSSKTPEEME-LEY 157
            :|..||     ..|.|         |||||                    :..::||:|:: :..
  Fly    98 LPCRGG-----GSAAP---------ATSPP--------------------QTPAQTPDELKVIPE 128

  Fly   158 EANVEAESRDIMTPLRRN-------TRPLSVS----FGGGGG------------RSALQP----- 194
            :.|:|..:......|.||       .|.:|.|    :||.||            .|...|     
  Fly   129 DCNLEKSAEQKRDLLERNNKEDDLLNRTVSGSELDLYGGAGGGTKKHSLADTIDTSVTTPISLKT 193

  Fly   195 -------EIVEAIRSLDVPALRL-----------NNLSFDGSTDP------KGERNHAEEEPLTP 235
                   |:.:.:.:.|:.|..|           ..|| |.|..|      :.::....::||..
  Fly   194 LINDVDEELDQQLSAADIAAASLASGLVARRAEPETLS-DASVSPTAVVQQQQQQQQQLQQPLLQ 257

  Fly   236 GHDHEDSVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAGK---------KNP---PTEEEEFR 288
            ...|    .:....|.|.:.  :||....|........|..:         :||   |.:.::..
  Fly   258 SQPH----FVPSSGNILSQV--TLYSGSNPSTNPCQSAVQNQGQNSNPNPNQNPNTNPNQNQQRC 316

  Fly   289 TFQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAITAACQRHQ---LDVTLVKSKEEALDTLQ 350
            :.|            |...||..:....:||........:.:.||   ..:|:......:.:::.
  Fly   317 SCQ------------PQTSPLPHIKEEEESDQANFKHQTSLKEHQPLPPPITIATGYCGSCESVH 369

  Fly   351 KSYATAQCYHLIIIDARSSKNLDAEHIART-----------IRHTHGHHLTTIIAVCKKSFFEKD 404
            .|.||:.....:....:.::    |:||.|           .|..|            ||.:.: 
  Fly   370 HSSATSSSAGTVPPGGQQTQ----EYIAGTSSTPSPRIKLKFRKPH------------KSCWSR- 417

  Fly   405 DVLIA-------------LLDAGVNRCVAE--------TTNLAMCSVELKQILHSIIRPHNVMST 448
             :::|             ::.:..|..:|.        ||.....||       |:...|.:.|:
  Fly   418 -IVLAPIGSAGGSSSATTVIGSNSNETLASSSTTGGTATTTQNSSSV-------SVAAHHRLTSS 474

  Fly   449 QQALYTALHRLKEVVLITD----------DLLRI--QYANRATERLLNMRLD------------- 488
            ..:.....|.....:|.|.          ||.:.  :|.......|.|:|.|             
  Fly   475 SASALATSHPSNSQLLPTSKMQAEQGSIGDLQKYHSRYLKNRRHTLANVRFDVENGQGARSPLEG 539

  Fly   489 ---------EIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVR-------VV 537
                     :.:.::.|.......|......|::.....|.:.|.|.||...:..|       |.
  Fly   540 GSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVT 604

  Fly   538 P----VACIGSAPTHLIFNFDVPG-------GQMDFIATLPQPKEAP------------RGSLHS 579
            |    :|.:.|...:|:...:||.       .|....:....|..||            ..::..
  Fly   605 PFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEE 669

  Fly   580 VRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLLS-------QVQEN-CSADEARLIDK 636
            :..|...:.:|.:    ..|::.:.||..:..:.|.::..|       |:.|. ||.    .:||
  Fly   670 LDWCLDQLETIQT----HRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICST----FLDK 726

  Fly   637 VLEFLKREGLYSPQMKEIRTDDPIATDLIGALLT----GPSVYSSRRSSN-------DSIIRTGS 690
            ..||         .:..:|.:|  ..:|:.|...    ....|:..||..       ..:.|..|
  Fly   727 QQEF---------DLPSLRVED--NPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLS 780

  Fly   691 STR--TAAIVPAKMKSNPIIME---LLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFAT 750
            .|.  |...:|......|...|   ||.|..:|...||.:.|.:...||..:...:|:..::..:
  Fly   781 HTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTS 845

  Fly   751 LNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDML--VMDRMEEATALI 813
            |.|.......:::.:|.||.|.|.:|||.|||||.|:|..    |.|...|  |...:|...||.
  Fly   846 LMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNV----LLNTPALEGVFTPLEVGGALF 906

  Fly   814 AAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKS 878
            ||..|||||||.::.||.||:..||::|||.:||||||.|:.||| |.:...:||.|:.|:..::
  Fly   907 AACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKL-LQNQGCDIFCNMQKKQRQT 970

  Fly   879 ARSTIIDMILATEMTRHFEHLAKFVSV-----FGGEEPRDHNPQTDEETSILMRRMLIKVADVSN 938
            .|..:||::|:|:|::|...||...::     ..|......:..||.   |.:...|:..||:||
  Fly   971 LRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDR---IQVLENLVHCADLSN 1032

  Fly   939 PARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWE 1003
            |.:|:.....|...:.||:|:|.|:|::..:.| .||.||...:|.|||:|||:||:..:...|.
  Fly  1033 PTKPLPLYKRWVALLMEEFFLQGDKERESGMDI-SPMCDRHNATIEKSQVGFIDYIVHPLWETWA 1096

  Fly  1004 SFI--DMPQLITYMQINYSQWKKYDEQGVNTLAEIMAKQPPVG 1044
            ..:  |...::..::.|...::          :.|....||.|
  Fly  1097 DLVHPDAQDILDTLEENRDYYQ----------SMIPPSPPPSG 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 20/124 (16%)
PAS_9 463..539 CDD:290162 20/120 (17%)
PDEase_I 775..1016 CDD:278654 93/249 (37%)
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 93/249 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459134
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
87.980

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