DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde4c

DIOPT Version :10

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001263694.1 Gene:Pde4c / 290646 RGDID:727918 Length:671 Species:Rattus norvegicus


Alignment Length:444 Identity:139/444 - (31%)
Similarity:223/444 - (50%) Gaps:55/444 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 RTSLAKLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIA 661
            |.|:.::.|...:..:.:.:..||:.        :|..::|.|::.:  .:..|..|:....|..
  Rat   228 RRSVGEMASNKFKRMLNRELTHLSET--------SRSGNQVSEYISQ--TFLDQQAEVELPAPPT 282

  Fly   662 TD--LIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAI--VPAKMKSNPIIMELLDESLSWDFDI 722
            .|  ...|.:||     .|:|.:.|:       .||||  ...:......:.:.|:::..|.||:
  Rat   283 EDHPWPMAQITG-----LRKSCHTSL-------PTAAIPRFGVQTDQEEQLAKELEDTNKWGFDV 335

  Fly   723 FKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQA 787
            ||:.|::...||..:...:.:..|:..|..|..:....:|..:|.||..:..||||.|||||:|:
  Rat   336 FKVAELSGNRPLTAVIFSVLQERDLLKTFQIPADTLLRYLLTLEGHYHSNVAYHNSIHAADVVQS 400

  Fly   788 TGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHA 852
              |.:...|.....|...:|...|:.|.|.|||||||.|:.||.|:|..||::|||.:||||||.
  Rat   401 --AHVLLGTPALEAVFTDLEVLAAIFACAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHL 463

  Fly   853 AITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQ 917
            |:.|||..|:: .:||:||..:...|.|..:|||:|||:|::|...||...::.          :
  Rat   464 AVGFKLLQGEN-CDIFQNLSTKQKLSLRRMVIDMVLATDMSKHMSLLADLKTMV----------E 517

  Fly   918 TDEETS------------ILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLP 970
            |.:.||            |.:.:.|:..||:||||:|:....:|..||..|:|.|.|.|::..|.
  Rat   518 TKKVTSLGVLLLDNYSDRIQVLQSLVHCADLSNPAKPLPLYRQWTERIMAEFFQQGDRERESGLD 582

  Fly   971 IVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFI--DMPQLITYMQINYSQW 1022
            | .||.|:.|.|:.|||:|||:||...:...|...:  |..:|:..::.| .:|
  Rat   583 I-SPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQELLDTLEDN-REW 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 NtrB 446..>539 CDD:443061
PDEase_I 775..1016 CDD:459723 99/254 (39%)
Pde4cNP_001263694.1 PDE4_UCR 154..270 CDD:465648 8/51 (16%)
PDEase_I 388..628 CDD:459723 99/253 (39%)
Blue background indicates that the domain is not in the aligned region.

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