DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde11a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_006499516.1 Gene:Pde11a / 241489 MGIID:3036251 Length:1011 Species:Mus musculus


Alignment Length:980 Identity:208/980 - (21%)
Similarity:340/980 - (34%) Gaps:261/980 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 LRRNTRPLSVSFGGGGGRSALQPEIVEAIRSLDVPALRLNNL----SFDGSTDPKGERNHAEEEP 232
            |:|:|        .|.|.|:|:|.:..|      .:|..:|.    ...|...|:|.   |...|
Mouse    39 LQRHT--------SGQGASSLRPALAGA------SSLAQSNAKGSPGIGGGAGPQGS---AHSHP 86

  Fly   233 LTPGHDHEDSVVL-------RRKVNCLERKAHSLYERR-LPRVPKLHL------LVAGKKNPPTE 283
             |||......|.|       .|....|:|:|.....|: ..|...:|:      .|..:...|..
Mouse    87 -TPGGGESAGVPLSPSWASGSRGDGSLQRRASQKELRKSFARSKAIHVNRTYDEQVTSRAQEPLS 150

  Fly   284 EEEFRTFQRNLMDLKYPTV-------------LPPNPPLKALLVFHKSDSICEAITAAC--QRH- 332
            ....|...|....|. ||.             ||..||              .||...|  ::| 
Mouse   151 SVRRRALLRKASSLP-PTTAHILSALLESRVNLPQYPP--------------TAIDYKCHLKKHN 200

  Fly   333 --QLDVTLVKSKEEALDTLQKSY---------ATAQCYHLIIIDARS-------SKNLDAEHIAR 379
              |..:.|||.....||....||         ..|....|.:::..:       ||..|.     
Mouse   201 ERQFFLELVKDISNDLDLTSLSYKILIFVCLMVDADRCSLFLVEGAAAGKKTLVSKFFDV----- 260

  Fly   380 TIRHTHGHHLTTIIAVCKKSFFEKDDVLIALLDAGVNRCV---AETTNL--------------AM 427
                    |..|.:..|..:  |..:.:......|:...|   .||.|:              .:
Mouse   261 --------HAGTPLLPCSST--ENSNEVQVPWGKGIIGYVGEHGETVNIPDAYQDRRFNDEIDKL 315

  Fly   428 CSVELKQILHSIIRPHN--VMSTQQALYTALHRLKEVVLITDDLLRIQYANRATERLLNMRLDEI 490
            ...:.|.:|...||..:  ::...|    |::::.|....|:|          .|:::.|.|   
Mouse   316 TGYKTKSLLCMPIRNSDGEIIGVAQ----AINKVPEGAPFTED----------DEKVMQMYL--- 363

  Fly   491 ISKQLEDIFVSDLSTISEQCKNIKEFDGILTV------RRKSQEGIP---MHVRVVPVACIGSAP 546
               ....|.:|:....:...|..:....:|.|      .:...|.|.   ||.....:.| ....
Mouse   364 ---PFCGIAISNAQLFAASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQTLLKC-ERCS 424

  Fly   547 THLIFNFDVPGGQMDFIATLPQPK---EAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKL---TS 605
            ..|:.:.:.|..:......|..||   :|......||.:.|:      ||.|...|:|:|   |.
Mouse   425 VLLLEDIESPVVKFTKSFELMSPKCSADAENSFKESVEKSSY------SDWLINNSIAELVASTG 483

  Fly   606 LPLEAP-------------------------------------ITKIINLLSQVQENCSADEA-- 631
            ||:...                                     :.:::|.|    :....|:|  
Mouse   484 LPVNVSDAYQDPRFDAEADQISGFHIRSVLCVPIWNSNHQIIGVAQVLNRL----DGKPFDDADQ 544

  Fly   632 RLIDKVLEF----LKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSST 692
            ||.:..:.|    :....:|. |:|:......:|.|::.        |.:..|.           
Mouse   545 RLFEAFVIFCGLGINNTIMYD-QVKKSWAKQSVALDVLS--------YHATCSK----------- 589

  Fly   693 RTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNID-EN 756
              |.:...|..:.|::.||..:.:  .||.|.|    |...::...:.||....:.....|| |.
Mouse   590 --AEVDKFKAANIPLVSELAIDDI--HFDDFSL----DVDAMITAALRMFMELGMVQKFKIDYET 646

  Fly   757 VCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVD 821
            :|: ||..:..:||.. .|||..||.:|.|...|.:|....:::|.  .:|....::....||:|
Mouse   647 LCR-WLLTVRKNYRMV-LYHNWRHAFNVCQLMFAMLTTAGFQEILT--EVEILAVIVGCLCHDLD 707

  Fly   822 HPGRSSAFLCNSNDALAVLYNDLTVLENHH--AAITFKLTLGDDKINIFKNLDKETYKSARSTII 884
            |.|.::||...|:.|||.||.....||:||  .|:   :.|..:..|||.||..:.|......:.
Mouse   708 HRGTNNAFQAKSDSALAQLYGTSATLEHHHFNHAV---MILQSEGHNIFANLSSKEYSDLMQLLK 769

  Fly   885 DMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEETSI-----LMRRMLIKVADVSNPARPMQ 944
            ..||||::|.:||...:|..:.         .:.|.:.||     :.|.||:...|:....:|.:
Mouse   770 QSILATDLTLYFERRTEFFELV---------RKGDYDWSITSHRDVFRSMLMTACDLGAVTKPWE 825

  Fly   945 FCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDR-ATCSIPKSQIGFIEYIIQDMMHAWESFIDM 1008
            ...:.|..:..|:|.|.|.|:.........:||| ....:|:.|:.:|:.|...:..:..|.|..
Mouse   826 ISRQVAELVTSEFFEQGDRERSELKLTPSAIFDRNRKDELPRLQLEWIDSICMPLYQSIGSNIRG 890

  Fly  1009 PQLIT 1013
            |:.:|
Mouse   891 PEFLT 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 15/88 (17%)
PAS_9 463..539 CDD:290162 14/84 (17%)
PDEase_I 775..1016 CDD:278654 69/247 (28%)
Pde11aXP_006499516.1 GAF 217..380 CDD:214500 31/197 (16%)
GAF 402..568 CDD:214500 32/177 (18%)
PDEase_I 663..885 CDD:365964 65/235 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844405
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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