DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde-6

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_001370828.1 Gene:pde-6 / 190808 WormBaseID:WBGene00022389 Length:760 Species:Caenorhabditis elegans


Alignment Length:807 Identity:229/807 - (28%)
Similarity:343/807 - (42%) Gaps:210/807 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 PPNPPLKALLVFHKSDSICEAITAACQRHQ----LDVTLVKS---------KEEALDTLQKS--- 352
            ||.|.|..            |.|::...|.    :.|.::|:         :...||:|:.|   
 Worm    79 PPTPLLTV------------AATSSSTAHDTFGPMQVKMLKTAVIVTEGTGESVLLDSLRASGWI 131

  Fly   353 -------YATAQ----CYHLIIIDARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKSFFEKDDV 406
                   .||:.    |...:.||.|..   ....||:.:.......: .|:::.:|...||.  
 Worm   132 CTVSFPTQATSDVESICPLAVFIDLRVP---HPSQIAKDVSSVSTEEV-LIVSIAEKHISEKR-- 190

  Fly   407 LIALLDAGVNRCVAETTNLAMCSVELKQILHSII-------------RPHNVMSTQQALYTALHR 458
                     .|.:|::           .|:|.:.             |..|.:....||:..|..
 Worm   191 ---------RRALAQS-----------NIIHHVTWNTRDVVLFDYVGRLANRIRALPALFAVLDE 235

  Fly   459 LKEVVLITDDLLRIQYANRATERLLNMRLDEIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVR 523
            ..:.|.|.|:...:||.|||.|.:......|:|.:...:                        :|
 Worm   236 TDQAVEICDEQRVVQYVNRAYENVTGCIRSEVIGQPESE------------------------MR 276

  Fly   524 RKSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSF--- 585
            |||                                       ||:    .||.....|.|.:   
 Worm   277 RKS---------------------------------------LPR----ARGEEERRRSCDWKFI 298

  Fly   586 --------------------DVRSIASDGLRRTSLAKLTSLP--LEAPITKIINLLSQVQENCSA 628
                                |..:|    .|..||..|.|..  :||||::::.:|..|......
 Worm   299 RVPFANNSQFVYMKRSNTTGDTAAI----FRDVSLKSLKSQTGGIEAPISEVLTMLRDVSARVDG 359

  Fly   629 DEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGAL--LTGP------SVYSSRRSSNDSI 685
            :.|:.|...::.|....||:|.:...|..|.|||.....|  |..|      ||..:.|....| 
 Worm   360 EPAQTIKDAMKVLSSHELYAPSINRFRDADRIATQYYDGLIRLHHPARQRKRSVVDAHREKRGS- 423

  Fly   686 IRTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFAT 750
              .|...|.:|.|          ...|:....|.|||..||:::|:|.|..:||::|.|:.|...
 Worm   424 --HGERRRVSADV----------KNALENDNCWKFDILHLEKVSDHHALSQVGMKVFERWKVCDV 476

  Fly   751 LNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLV-MDRMEEATALIA 814
            |...:::...|:..|||||...|||||:||||||:|||..|   |.:..:.| ::......||:|
 Worm   477 LGCSDDLLHRWILSIEAHYHAGNTYHNATHAADVLQATSFF---LDSPSVAVHVNESHAVAALLA 538

  Fly   815 AAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDD-KINIFKNLDKETYKS 878
            ||.||:|||||.:|:|.|:..:||:||||.::|||||.|:.|:|||..: .:|||.:|.:|.:..
 Worm   539 AAVHDLDHPGRGNAYLINTRQSLAILYNDNSILENHHIALAFQLTLQHNANVNIFSSLSREEFIQ 603

  Fly   879 ARSTIIDMILATEMTRHFEHLAKFVSVF---GGEEPRDHNPQTDEETSILMRRMLIKVADVSNPA 940
            .|..:::|:|||:::||||:||||..:.   ..||.||.|       |:.:..||:|.||:||||
 Worm   604 MRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTN-------SLTICDMLVKCADISNPA 661

  Fly   941 RPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESF 1005
            |....|..||.||.||||.||.|||::.||:.|.:|||.||::|.:|.|||:...::....:..|
 Worm   662 REWGLCQRWAHRIVEEYFEQTREEKEKGLPVTMEVFDRNTCNVPITQCGFIDMFAREAFATFTEF 726

  Fly  1006 IDMPQLITYMQINYSQWKKYDEQGVNT 1032
            ..:.:|...::.||.:||....|...|
 Worm   727 AKLGELSDQLESNYEKWKVMTSQWTPT 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 15/79 (19%)
PAS_9 463..539 CDD:290162 15/75 (20%)
PDEase_I 775..1016 CDD:278654 109/245 (44%)
pde-6NP_001370828.1 PDEase_I 501..737 CDD:395177 109/245 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167985
Domainoid 1 1.000 208 1.000 Domainoid score I1664
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80286at33208
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - oto18928
orthoMCL 1 0.900 - - OOG6_105168
Panther 1 1.100 - - LDO PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 1 1.000 - - X2464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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