DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and Pde3b

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:NP_035185.2 Gene:Pde3b / 18576 MGIID:1333863 Length:1099 Species:Mus musculus


Alignment Length:587 Identity:141/587 - (24%)
Similarity:233/587 - (39%) Gaps:110/587 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 FVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVRVVPVACIGSAPTHLIFNFD--VPGGQMD 561
            |.|:|.||.:|              |.|...:..|   ..:...|:.|:|.:.|..  ||     
Mouse   460 FSSNLFTIPKQ--------------RSSSVSLTHH---AGLRRAGALPSHSLLNSSSHVP----- 502

  Fly   562 FIATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLLSQVQENC 626
                      ...|||.:.....|   ...:|.|.:.::....||...:........|.....|.
Mouse   503 ----------VSAGSLTNRSPIGF---PDTTDFLTKPNIILHRSLGSVSSAADFHQYLRNSDSNL 554

  Fly   627 SADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 691
            .:.....|.|.:...:.:|...|..|....|..:.:.....::......:.:::..:..:...|.
Mouse   555 CSSCGHQILKYVSTCEPDGTDHPSEKSGEEDSSVFSKEPLNIVETQEEETMKKACRELFLEGDSH 619

  Fly   692 TRTAAIVP---AKMKSNPIIME----LLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFD--- 746
            ....|..|   .::..:|:::|    |:::..:|:|.||:|.|.........|...|:..|.   
Mouse   620 LMEEAQQPNIDQEVSLDPMLVEDYDSLIEKMNNWNFQIFELVEKMGEKSGRILSQVMYTLFQDTG 684

  Fly   747 VFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQ----------------- 794
            :..|..|.......:...:|..|| ...|||..||.||:.|.....|:                 
Mouse   685 LLETFKIPTQEFMNYFRALENGYR-DIPYHNRVHATDVLHAVWYLTTRPIPGLPQIHNNHETETK 748

  Fly   795 --------------LTNKDMLVMD-----------RMEEATALIAAAAHDVDHPGRSSAFLCNSN 834
                          :::|...:.|           .:|.....:|||.||.|||||::|||..:|
Mouse   749 ADSDGRLGSGQIAYISSKSCCIPDMSYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATN 813

  Fly   835 DALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHL 899
            ...||||||.:||||||||..:.|.|...:.|...|||...:|..|..:|:.||||::.:||:.|
Mouse   814 APQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLNLDHMEFKRFRFLVIEAILATDLKKHFDFL 878

  Fly   900 AKFVSVFGGEEPRDHNPQ----TDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQ 960
            |:|     ..:..|.|..    :.|...:|:.::.||:||::.||:.....:.|...|..|::.|
Mouse   879 AEF-----NAKANDVNSNGIEWSSENDRLLVCQVCIKLADINGPAKDRDLHLRWTEGIVNEFYEQ 938

  Fly   961 TDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFIDMPQLITYMQINYSQWKKY 1025
            .|||....||| .|..||::..:.|.|..||.:|:..:.:::::...:|          .||.:.
Mouse   939 GDEEATLGLPI-SPFMDRSSPQLAKLQESFITHIVGPLCNSYDAAGLLP----------GQWIET 992

  Fly  1026 DE 1027
            :|
Mouse   993 EE 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 9/39 (23%)
PAS_9 463..539 CDD:290162 9/39 (23%)
PDEase_I 775..1016 CDD:278654 87/286 (30%)
Pde3bNP_035185.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Interaction with RAPGEF3. /evidence=ECO:0000250 1..28
DUF1109 60..241 CDD:284050
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..423
Interaction with PIK3R6. /evidence=ECO:0000250 415..439
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..590 4/19 (21%)
PDEase_I 712..986 CDD:278654 86/279 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844410
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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