DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde8a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_012814959.2 Gene:pde8a / 100497070 XenbaseID:XB-GENE-6051349 Length:876 Species:Xenopus tropicalis


Alignment Length:896 Identity:323/896 - (36%)
Similarity:474/896 - (52%) Gaps:112/896 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 DGSTDPKGERNHAEEEPLTPGHDHEDSVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAGKKNP 280
            |.|..|......|::....||...:.|.....||     :|:|..:.|....|.:...:....|.
 Frog    23 DDSNSPHQTNTLAQQGNSVPGLFIKSSHTSTYKV-----RANSSRKGRRENSPSMEAEINSSTNS 82

  Fly   281 PTE-----------EEEFRTFQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAITAACQRHQL 334
            .|.           :...|..|...|.|:       ...|:.||||.|.||.......||::...
 Frog    83 STNSSTNSSTSTAVKAAVREVQFGPMKLR-------QDQLQVLLVFAKEDSQSNGFCWACEKAGF 140

  Fly   335 DVTLVKSKEEALDTLQKSYATAQCYHLIIIDARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKS 399
            ...:.::.|.||::....:     :.:||||.|.|:..|||.:.|:||.|.....|.|:||.::.
 Frog   141 KCNIARTPETALESFLDKH-----HEIIIIDHRHSRYFDAEALCRSIRATKPSENTVIVAVVRRQ 200

  Fly   400 FFEKDDVLIALLDAGVNRCVAETTNLAMCSVELKQILHSIIRPHNVMSTQQALYTALHRLKEVVL 464
            ....:..::.|:.||..|...|.:|:..|..||.|:....:.....:....:|:|.|.:.:|.:.
 Frog   201 SDRDEASIMPLISAGFTRRYVENSNIMACYNELIQLEFGEVLAQFKLRACNSLFTTLEKSQEAIE 265

  Fly   465 ITDDLLRIQYANRATERLLNMRLDEIISKQLEDIFVSD-----LSTISEQCKNIKEFDGILTVRR 524
            ||.:...|||.|.|.|..:..:.||:|.|:|.::.:::     |.||:...|..||::||...:.
 Frog   266 ITSEDHIIQYVNPAFESTMGYQKDELIGKELTEVPINEKKSDFLDTINCCIKTGKEWEGIYYAKN 330

  Fly   525 KSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQP--------KEAPRGSLHS-- 579
            |:.:.|..:|:::||  .|..            |::....::.:|        |:..|....|  
 Frog   331 KNGDNIQQNVKIIPV--FGHR------------GKIRHYVSISRPCSDNNKAEKQCERVQAESQT 381

  Fly   580 -VRRC--------SFDVRSIASDG-----------------LRRTSLAKLTSLPLEAPITKIINL 618
             ::.|        |.||||..|.|                 .|.:|:|::.|:.:||||||:||:
 Frog   382 DIQTCRHKDRRKGSLDVRSTTSRGSDGPAEFSHGALPGSSQRRHSSMARIHSMTIEAPITKVINI 446

  Fly   619 LSQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSND 683
            ::..|||..:..|..:|:|||.|:...|||||: ..:.:||...||:|.|:|.    ..||.|.:
 Frog   447 INAAQENSPSPVAEALDRVLEILRTTELYSPQL-GTKDEDPHTNDLVGGLMTD----GLRRLSGN 506

  Fly   684 SIIRTGSSTRTAA--IVPAKMKSN--PIIMELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRR 744
            ..|.:.......:  ::.|...|:  |.|.:.:|....|:||||:||..|...||:|||::||.|
 Frog   507 EYILSAKQVHPVSGHMILALSLSDIPPRIAQAMDNEEDWEFDIFELEAATHKRPLVYLGLKMFAR 571

  Fly   745 FDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEA 809
            |.|...||..|...::||.|||::|..||.||||||:|||:.||..|:.:...|..|  |:::|.
 Frog   572 FGVCQFLNCSEATLRSWLHVIESNYHSSNAYHNSTHSADVLHATAYFLCKERVKQSL--DQIDEV 634

  Fly   810 TALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKE 874
            .|||||..||||||||:::||||:...||:||||..|||:||||:.|:||..|||.|||||:::.
 Frog   635 AALIAATVHDVDHPGRTNSFLCNAGSELAILYNDTAVLESHHAALAFQLTTRDDKCNIFKNMERN 699

  Fly   875 TYKSARSTIIDMILATEMTRHFEHLAKFVSVF----------GGEEPRDH---NPQTDEETSILM 926
            .|::.|..||||:||||||:||||:.|||:..          ||....|.   |..|..|..||:
 Frog   700 EYRTLRQAIIDMVLATEMTKHFEHVNKFVNSINKPLAAVEENGGSIEEDEAVKNILTSPENRILI 764

  Fly   927 RRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFI 991
            :|||||.||:|||.|.::.|||||.||:||||.||||||::.||:|||:|||.|||||||||.|:
 Frog   765 KRMLIKCADISNPCRALEQCIEWAGRISEEYFAQTDEEKRKGLPVVMPVFDRNTCSIPKSQISFV 829

  Fly   992 EYIIQDMMHAWESFIDMPQLITYMQINYSQWKKYDEQGVNTLAEIMAKQPP 1042
            :|.|.||..||::|.|:|.|:.::..|:..||..||:.:.||     :.||
 Frog   830 DYFITDMFDAWDAFADLPNLMQHLDNNFKYWKSLDERQLKTL-----RPPP 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 25/84 (30%)
PAS_9 463..539 CDD:290162 24/80 (30%)
PDEase_I 775..1016 CDD:278654 140/253 (55%)
pde8aXP_012814959.2 PDE8 1..48 CDD:400795 6/24 (25%)
PAS 151..360 CDD:225112 61/227 (27%)
PAS_9 262..360 CDD:404329 29/111 (26%)
PDEase_I 602..854 CDD:395177 140/253 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 285 1.000 Domainoid score I1585
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 531 1.000 Inparanoid score I1192
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80286at33208
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm47491
Panther 1 1.100 - - O PTHR11347
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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