DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde10a

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_031757888.1 Gene:pde10a / 100485841 XenbaseID:XB-GENE-1013417 Length:799 Species:Xenopus tropicalis


Alignment Length:602 Identity:128/602 - (21%)
Similarity:217/602 - (36%) Gaps:198/602 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   576 SLHSVRRCSFDVRSIASDGLRRTSLAKLTSLP---LEAPITKIINLLSQVQENCSADEARLIDKV 637
            ::|.|:.|              ..|||.|.|.   |:...|...|:::             ||.:
 Frog   248 AIHQVQVC--------------RGLAKQTELNDFLLDVSKTYFDNIVA-------------IDSL 285

  Fly   638 LEFL--------------------KREGLYS---------------PQMKEIR--TDDPIATDL- 664
            ||.:                    |.:.|||               .:.||||  .:..||..: 
 Frog   286 LEHIMIYAKNLVNADRCALFQVDHKNKELYSDLFDIGEEDEGKPVFKKTKEIRFSIEKGIAGQVA 350

  Fly   665 -IGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPI-IMELLD-------------- 713
             .|.:|..|..|:..|.:.:..:.||.:||....:|..::.:.| ::::::              
 Frog   351 RTGEVLNIPDAYADPRFNREVDVYTGYTTRNILCMPIVIRGSVIGVVQMVNKLSGSAFSKTDENN 415

  Fly   714 --------------------------------ESLS---------WD------------------ 719
                                            |.||         |.                  
 Frog   416 FKMFAVFCALALHCANMYHRIRHSECIYRVTLEKLSYHSICTSDEWQNLMNCTLPVSLCREIELY 480

  Fly   720 -FDIFKLEEITDYHPLLYL-------GMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYH 776
             |||...|   |..|.:|:       |...|..          |.:|:..::| :.:||:. .||
 Frog   481 HFDIQPFE---DLWPAIYVYMIHQSCGKNCFEL----------EKLCRFTMSV-KKNYRRV-PYH 530

  Fly   777 NSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLY 841
            |..||..|...  .::....|::  :...:|....|:|...||:||.|.::::|...:..||.||
 Frog   531 NWKHAVTVSHC--MYVILQNNQE--IFTDLERKGLLVACLCHDLDHRGYTNSYLQKFDHPLAALY 591

  Fly   842 NDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMT------RHFEHLA 900
            :..| :|.||.:.|..: |..:..|||.||....|:.....|...|:||::.      :|.|.|.
 Frog   592 STST-MEQHHFSQTVSI-LQLEGHNIFSNLSSNEYEQVLEIIRKAIIATDLALYFGNRKHLEDLH 654

  Fly   901 KFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPAR--PMQFCIEWARRIAEEYFMQTDE 963
            :..::       :.|.|...:..|   .:::...|:.:..:  |:...|  |..|..|::.:.||
 Frog   655 QMGAL-------NLNNQAHRDRLI---GLMMTACDLCSVTKLWPVTRLI--ADDIYAEFWTEGDE 707

  Fly   964 EKQRHL-PIVMPMFDR-ATCSIPKSQIGFIEYI-IQDMMHAWESFIDMPQLITYMQINYSQWKKY 1025
            .|:..: ||  ||.|| ....||:.|:||...: :.......|.|.....|:...:.|.|||:|.
 Frog   708 MKRLGISPI--PMMDRDKQDEIPQGQMGFYNAVAVPCYTTLSEIFPSTRPLLQACKENLSQWEKV 770

  Fly  1026 DEQGVNTLAEIMAKQPP 1042
             .:|.:|...|.::..|
 Frog   771 -SRGEDTTVWIPSQSLP 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075
PAS_9 463..539 CDD:290162
PDEase_I 775..1016 CDD:278654 65/251 (26%)
pde10aXP_031757888.1 GAF 110..223 CDD:396252
GAF 282..437 CDD:214500 25/154 (16%)
PDEase_I 529..761 CDD:395177 65/251 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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