DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde8 and pde5aa

DIOPT Version :9

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_009305135.1 Gene:pde5aa / 100334568 ZFINID:ZDB-GENE-100414-2 Length:922 Species:Danio rerio


Alignment Length:1138 Identity:225/1138 - (19%)
Similarity:359/1138 - (31%) Gaps:396/1138 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KSSAKSSSSSAGRENPSSEPDS-------DTEPYAIAIAA---------------ISDRSGDNRN 57
            :..::.|.|.:|::..|.|..:       :.|..||..||               :..|.| ..:
Zfish    24 RRGSQGSRSKSGKKRKSGEKSTRVERNEIEKEQCAITSAAWFFTPLWVPGAKTQRLGFRMG-KES 87

  Fly    58 ERPRPLPDD--DSIRSRLISAAHLDLDVGLELASDSTAVPANGGIRPKSEGACPEMKVETISAAT 120
            |:.:...||  ||.||..               |.|:....||         |.|   ...:|.|
Zfish    88 EKVKAWLDDYSDSARSYF---------------SRSSRNWMNG---------CAE---RAQAAQT 125

  Fly   121 SPPPPRPLHGTSGPVAISLPFVGRNSSKTPEEMELEYEANVEAESRDIMTP-----------LRR 174
            ....||......|...:|.|..|                    .||.::.|           :.:
Zfish   126 LITEPRSKTTVLGRRRVSHPMSG--------------------PSRALVHPVTMQRPQSCLSVHQ 170

  Fly   175 NTRPLSVSFGGGGGRSALQPEIVEAIRSLDVPA-LRLNNLSFDGSTDPKGERNHAEEEPLTPGHD 238
            ...|.|:..|||....:|||     |.....|. .|....||.||..|.|:              
Zfish   171 TDHPESLDQGGGHFPRSLQP-----IHFTFSPCRSRSRCSSFLGSPRPAGQ-------------- 216

  Fly   239 HEDSVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAGKKNPPTEEEEFRTFQRNLMDLKYPTVL 303
                  .||..:|                                     .|...|.......:.
Zfish   217 ------CRRGESC-------------------------------------AFMMQLFSGLIGALQ 238

  Fly   304 PPNPPLKALLVFHKSDSICEAITAACQRHQLDVTLV-KSKEEALDTLQKSYATAQCYHLIIIDAR 367
            ..|..|:.|      ..:||...|  ||..|.:|.| |:..:.|..:.:|.|.:     :..:|:
Zfish   239 DKNLHLQVL------QHLCEVTEA--QRVSLSMTTVDKTGGKCLGPVLQSDADS-----VHSNAQ 290

  Fly   368 SSKNLD-AEHIAR-----TIRHTHG-------------------------HHLTTIIAV------ 395
            :..|.. .|::.|     |::..|.                         :|...:|.|      
Zfish   291 TKWNKSIMEYVVRTGRPLTVKDAHEDPRFQVELYEGEEDRPTSVLSVPVLNHKKEVIGVVLAVNK 355

  Fly   396 ---CKKSFFEKDDVLIALLDAGVNRCVAETTNLAMCS----------VELKQILHSIIRPHNVMS 447
               |..|||.:.|..:......:...:.|...|...|          :||.|::     .|:..|
Zfish   356 TRTCASSFFSEQDEKVLSSHMMLFGLILENHQLCESSEQENKRNQVLLELAQLV-----SHDYPS 415

  Fly   448 TQQALYTALHRLKEVVL-----------ITDDLLRIQYANRATERLLNMRLDEI---ISKQLEDI 498
            ..    ..|..|..|:|           |:||     .:.|...|::.:..:||   :.....|.
Zfish   416 VD----AMLGELAAVILPITKAQFCTVFISDD-----SSTRLFSRMVRIEYEEIECSVHCSSRDC 471

  Fly   499 FVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFI 563
            ...|:|.|                       ..|||:       .|..|..|.|..:        
Zfish   472 DTDDVSYI-----------------------YAMHVQ-------NSMETLNIVNRPI-------- 498

  Fly   564 ATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKIINLLSQVQENCSA 628
             ::..|                 :||:....||    .|.:|           |::...|     
Zfish   499 -SMVSP-----------------IRSLIGAPLR----GKQSS-----------NVIGVCQ----- 525

  Fly   629 DEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTR 693
                |::|.:...:.|..       .|.|:.:..|.        :||.:......:..:|...||
Zfish   526 ----LVNKRMAIAESEAF-------SRADEHLLEDF--------AVYCALGLQKFNTQQTADKTR 571

  Fly   694 TAAIVPAKMKSNPI-------------------IMELLDESLSWDFDIFKLEEITDYHPLLYLGM 739
            ....|..::.|..|                   .:.|||...| |||:.: ..:|.....::|.:
Zfish   572 VRLAVTKEVLSYQISASQEEINELEEAAIPSADTLSLLDFGFS-DFDMSQ-NAMTQAVVRMFLDL 634

  Fly   740 EMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMD 804
            .:.:.|      .||......|:..::..||.:..|||.:||....|...|.:.....|..|  .
Zfish   635 NLPQEF------KIDYKALCQWVLSVQKCYRSNVVYHNWSHALRTAQCMFAMLQTKELKSNL--S 691

  Fly   805 RMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFK 869
            .:|....:||:.:||:||.|.:::::..||..||.||.. :.||:||..:.. |.|.:....|..
Zfish   692 SLEVLALMIASLSHDLDHRGVNNSYIQRSNQPLAQLYGQ-SSLEHHHYDMCL-LILNNPGSQILS 754

  Fly   870 NLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNP--QTDEETSILMRRMLIK 932
            :|....|.:....|...||||::...||...||..:      .::|.  ..||....|:|.||:.
Zfish   755 SLSVNEYMACLQMIEKNILATDLAIFFEKRTKFFKL------AENNSCLWKDEGHRELLRSMLMT 813

  Fly   933 VADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPI-VMPMFDRATCS-IPKSQIGFIEYII 995
            .:|:....:|.......|..:|.|::.|.|.|| |.|.| .:.:.||...| :|:.|:.:|:.|.
Zfish   814 ASDICAITKPWPVQKRIAELVATEFYAQGDREK-RELNIQPIDVMDRENASRLPQMQVDYIDGIC 877

  Fly   996 QDMMHA---------------------WESFID 1007
            ..:..|                     |:..:|
Zfish   878 SPLYEALAFICESCSPLKEGCSKNRKHWQEMVD 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 PAS 459..539 CDD:238075 17/93 (18%)
PAS_9 463..539 CDD:290162 15/89 (17%)
PDEase_I 775..1016 CDD:278654 70/258 (27%)
pde5aaXP_009305135.1 GAF 245..388 CDD:214500 28/155 (18%)
GAF 415..558 CDD:307634 40/246 (16%)
PDEase_I 664..894 CDD:306695 68/240 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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