DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde8 and pde1b

DIOPT Version :10

Sequence 1:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster
Sequence 2:XP_017946519.1 Gene:pde1b / 100036722 XenbaseID:XB-GENE-987197 Length:554 Species:Xenopus tropicalis


Alignment Length:587 Identity:145/587 - (24%)
Similarity:244/587 - (41%) Gaps:114/587 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   520 LTVRRKSQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCS 584
            |:..|:.|.|.|:             |.|                  |...|:|......:..|:
 Frog     3 LSTTRRLQRGTPL-------------PLH------------------PGMMESPSVDKDLLEGCT 36

  Fly   585 --FDVRSIASDGL--RRTSLAKLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREG 645
              |:::|..|..:  :..||.|.....||.....|:.|...::...|..||..||:..:.|..: 
 Frog    37 SPFELKSAPSKKMWVKLRSLLKYMVKQLENGEVNIVELKKNLEYTASLLEAVYIDETRQILDTD- 100

  Fly   646 LYSPQMKEIRTDD--PIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKM------ 702
               .::.|:|:|.  ....|.:.:..|..:..:.|||......|:......|.|...:|      
 Frog   101 ---DELPEMRSDSVPSEVRDWLASTFTQQTRSTGRRSEEKPRFRSIVHAVQAGIFVERMFRRSYT 162

  Fly   703 -----KSNPIIMELLDESLSWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWL 762
                 .|..::..|....| ||||:|.|..:::.|.|..:..|:..|.::.:...|......::|
 Frog   163 AVGPNYSAAVVNSLKHLDL-WDFDVFVLNRVSEDHALKTIVFELLSRHNLNSRFKIPVAFLMSFL 226

  Fly   763 AVIEAHYRK-SNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRS 826
            ..:|:.|.| .|.|||..|||||.|....|:  |....:..::.:|....:.|||.||.:|.|.:
 Frog   227 DSLESGYGKYKNPYHNQIHAADVTQTVHCFL--LRTGMVHCLNEIEILAIIFAAAIHDFEHTGTT 289

  Fly   827 SAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATE 891
            ::|...:....|:||||.:||||||.:..::: :.||::|||.||.|:.:...||.:|:|:|||:
 Frog   290 NSFHIQTKSDCAILYNDRSVLENHHVSAVYRI-MQDDEMNIFVNLTKDEFTELRSLVIEMVLATD 353

  Fly   892 MTRHFEHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADVSNPARPMQFCIEWARRIAEE 956
            |:.||:.:....:..       ...:|.:::..|  .:|:..||:|:|.:..:....|.:.:.||
 Frog   354 MSCHFQQVKTMKTSL-------QQLETIDKSKAL--SLLLHAADISHPTKQWKVHARWTKALMEE 409

  Fly   957 YFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYI--------------------------- 994
            :|.|.|:|.:..||. .|:.||.:..:.:|||||||:|                           
 Frog   410 FFRQGDKEAEMGLPF-SPLCDRKSTLVAQSQIGFIEFIVDPTFSVLTDVAEKTVLPLVEERSKSK 473

  Fly   995 ----------------IQDMMHAWESFIDMPQLIT----YMQINYSQWKKYDEQGVNTLAEIMAK 1039
                            |.|.....:...|:....|    |:|.|..:||:....|:.....:...
 Frog   474 STASVNQSSSQWRQPSIDDHSEMGDINADIKSFRTTWTKYIQENKQKWKERAASGITNQTSVDEL 538

  Fly  1040 QP 1041
            .|
 Frog   539 SP 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde8NP_001163275.2 NtrB 446..>539 CDD:443061 5/18 (28%)
PDEase_I 775..1016 CDD:459723 81/287 (28%)
pde1bXP_017946519.1 PDEase_I_N 95..155 CDD:462497 12/63 (19%)
PDEase_I 240..467 CDD:459723 76/239 (32%)

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