DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eglp4 and kitlg

DIOPT Version :9

Sequence 1:NP_001261154.1 Gene:Eglp4 / 37739 FlyBaseID:FBgn0034885 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_012814628.1 Gene:kitlg / 733847 XenbaseID:XB-GENE-490160 Length:270 Species:Xenopus tropicalis


Alignment Length:49 Identity:17/49 - (34%)
Similarity:21/49 - (42%) Gaps:14/49 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SSLFSVALFKRFSDHF----SCCKVFKMKGSTLDKISAFLGELIGTGIL 70
            |||:.|..||. .|.|    |..:|||...:|         |..||.:|
 Frog   120 SSLYQVEGFKP-RDFFNYVTSTIEVFKEINNT---------EYTGTCVL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eglp4NP_001261154.1 MIP 59..272 CDD:294134 4/12 (33%)
kitlgXP_012814628.1 SCF 1..259 CDD:308163 17/49 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0580
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000054
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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