DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eglp4 and rars1

DIOPT Version :9

Sequence 1:NP_001261154.1 Gene:Eglp4 / 37739 FlyBaseID:FBgn0034885 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_989403.1 Gene:rars1 / 395040 XenbaseID:XB-GENE-955966 Length:660 Species:Xenopus tropicalis


Alignment Length:42 Identity:11/42 - (26%)
Similarity:24/42 - (57%) Gaps:4/42 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 VTTGQALGIEFVITSILVIVCCGVWDPRNSKF-HDSVGIRFG 215
            :.:|||:.::.|.::..:|   |.:||:.::. |...|:..|
 Frog   408 IDSGQAIHMQNVFSAGRMI---GWYDPKVTRIEHAGFGVVLG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eglp4NP_001261154.1 MIP 59..272 CDD:294134 11/42 (26%)
rars1NP_989403.1 Could be involved in the assembly of the multisynthetase complex. /evidence=ECO:0000250 1..72
Syntaphilin <9..>79 CDD:373718
PLN02286 79..660 CDD:215160 11/42 (26%)
L-arginine binding. /evidence=ECO:0000250|UniProtKB:P54136 200..202
'HIGH' region 201..212
Interaction with tRNA. /evidence=ECO:0000250|UniProtKB:Q05506 529..543
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000054
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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